Difference between revisions of "SJ20867"

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(Created page with "Category:gene == Gene SJ11779 == * transcription-direction: ** negative * right-end-position: ** 45296 * left-end-position: ** 43800 * centisome-position: ** 11.931030...")
(Created page with "Category:gene == Gene SJ13957 == * transcription-direction: ** positive * right-end-position: ** 380459 * left-end-position: ** 373689 * centisome-position: ** 51.466995...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ11779 ==
+
== Gene SJ13957 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 45296
+
** 380459
 
* left-end-position:
 
* left-end-position:
−
** 43800
+
** 373689
 
* centisome-position:
 
* centisome-position:
−
** 11.931030    
+
** 51.466995    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PROTEIN-KINASE-RXN]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=negative}}
+
* [[PHOSPHATIDATE-PHOSPHATASE-RXN]]
−
{{#set: right-end-position=45296}}
+
** Category: [[annotation]]
−
{{#set: left-end-position=43800}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: centisome-position=11.931030   }}
+
* [[RXN-11277]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16030]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16121]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17730]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[TRIGLSYN-PWY]]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7039]]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6453]]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7782]]
 +
** '''11''' reactions found over '''16''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=380459}}
 +
{{#set: left-end-position=373689}}
 +
{{#set: centisome-position=51.466995   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=6}}
 +
{{#set: nb pathway associated=4}}

Revision as of 15:15, 5 January 2021

Gene SJ13957

  • transcription-direction:
    • positive
  • right-end-position:
    • 380459
  • left-end-position:
    • 373689
  • centisome-position:
    • 51.466995

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • TRIGLSYN-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-7039
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6453
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-7782
    • 11 reactions found over 16 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ20867&oldid=66763"