Difference between revisions of "SJ20887"

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(Created page with "Category:gene == Gene SJ21054 == * transcription-direction: ** negative * right-end-position: ** 107903 * left-end-position: ** 103626 * centisome-position: ** 51.865387...")
(Created page with "Category:gene == Gene SJ20887 == * transcription-direction: ** negative * right-end-position: ** 336921 * left-end-position: ** 331160 * centisome-position: ** 54.24424...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ21054 ==
+
== Gene SJ20887 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 107903
+
** 336921
 
* left-end-position:
 
* left-end-position:
−
** 103626
+
** 331160
 
* centisome-position:
 
* centisome-position:
−
** 51.865387    
+
** 54.24424    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[ATPASE-RXN]]
+
* [[3.1.1.64-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN]]
+
* [[3.1.1.73-RXN]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN]]
+
* [[CARBOXYLESTERASE-RXN]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10711]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10767]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12195]]
+
* [[RXN-12086]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-12252]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12196]]
+
* [[RXN-12575]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-5462]]
+
* [[RXN-12579]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXNQT-4366]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[TRIACYLGLYCEROL-LIPASE-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6147]]
+
* [[PWY-6784]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7539]]
+
* [[PWY-6303]]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6797]]
+
* [[PWY-6857]]
 
** '''3''' reactions found over '''7''' reactions in the full pathway
 
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-7210]]
+
* [[LIPAS-PWY]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7198]]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7184]]
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-6545]]
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=107903}}
+
{{#set: right-end-position=336921}}
−
{{#set: left-end-position=103626}}
+
{{#set: left-end-position=331160}}
−
{{#set: centisome-position=51.865387   }}
+
{{#set: centisome-position=54.24424   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=7}}
+
{{#set: nb reaction associated=12}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:10, 18 March 2021

Gene SJ20887

  • transcription-direction:
    • negative
  • right-end-position:
    • 336921
  • left-end-position:
    • 331160
  • centisome-position:
    • 54.24424

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6784
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6303
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6857
    • 3 reactions found over 7 reactions in the full pathway
  • LIPAS-PWY
    • 2 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ20887&oldid=136302"