Difference between revisions of "SJ20887"

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(Created page with "Category:gene == Gene SJ15529 == * transcription-direction: ** negative * right-end-position: ** 143017 * left-end-position: ** 137617 * centisome-position: ** 46.80707...")
(Created page with "Category:gene == Gene SJ20535 == * transcription-direction: ** positive * right-end-position: ** 102498 * left-end-position: ** 96383 * centisome-position: ** 46.631897...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ15529 ==
+
== Gene SJ20535 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 143017
+
** 102498
 
* left-end-position:
 
* left-end-position:
** 137617
+
** 96383
 
* centisome-position:
 
* centisome-position:
** 46.80707    
+
** 46.631897    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[3PGAREARR-RXN]]
+
* [[RXN-13779]]
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-15509]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-15510]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-15511]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-15512]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-15513]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7237]]
* [[PWY-6142]]
+
** '''4''' reactions found over '''4''' reactions in the full pathway
** '''10''' reactions found over '''13''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
* [[PWY-7003]]
+
{{#set: right-end-position=102498}}
** '''8''' reactions found over '''6''' reactions in the full pathway
+
{{#set: left-end-position=96383}}
* [[PWY-7218]]
+
{{#set: centisome-position=46.631897   }}
** '''7''' reactions found over '''4''' reactions in the full pathway
 
* [[GLYCOLYSIS]]
 
** '''11''' reactions found over '''12''' reactions in the full pathway
 
* [[P341-PWY]]
 
** '''6''' reactions found over '''10''' reactions in the full pathway
 
* [[PWY-5723]]
 
** '''10''' reactions found over '''10''' reactions in the full pathway
 
* [[P124-PWY]]
 
** '''12''' reactions found over '''15''' reactions in the full pathway
 
* [[PWY-2221]]
 
** '''6''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-5484]]
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
* [[PWY-1042]]
 
** '''9''' reactions found over '''10''' reactions in the full pathway
 
* [[PWY-6886]]
 
** '''8''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-6901]]
 
** '''10''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-7124]]
 
** '''8''' reactions found over '''8''' reactions in the full pathway
 
* [[GLUCONEO-PWY]]
 
** '''12''' reactions found over '''13''' reactions in the full pathway
 
* [[PWY-6405]]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[P122-PWY]]
 
** '''16''' reactions found over '''18''' reactions in the full pathway
 
* [[PWY-1622]]
 
** '''6''' reactions found over '''13''' reactions in the full pathway
 
* [[ANAGLYCOLYSIS-PWY]]
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
* [[PWY66-399]]
 
** '''11''' reactions found over '''12''' reactions in the full pathway
 
</div>
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=143017}}
 
{{#set: left-end-position=137617}}
 
{{#set: centisome-position=46.80707   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=19}}
+
{{#set: nb pathway associated=1}}

Revision as of 09:27, 27 August 2019

Gene SJ20535

  • transcription-direction:
    • positive
  • right-end-position:
    • 102498
  • left-end-position:
    • 96383
  • centisome-position:
    • 46.631897

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7237
    • 4 reactions found over 4 reactions in the full pathway