Difference between revisions of "SJ20895"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-9699 CPD-9699] == * common-name: ** hypoglycin a * smiles: ** c=c1(c(cc([n+])c([o-])=o)c1)...")
(Created page with "Category:gene == Gene SJ20895 == * transcription-direction: ** negative * right-end-position: ** 486447 * left-end-position: ** 478782 * centisome-position: ** 78.42483...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-9699 CPD-9699] ==
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== Gene SJ20895 ==
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* common-name:
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* transcription-direction:
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** hypoglycin a
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** negative
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* smiles:
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* right-end-position:
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** c=c1(c(cc([n+])c([o-])=o)c1)
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** 486447
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* inchi-key:
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* left-end-position:
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** oojzcxfxpzgubj-uhfffaoysa-n
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** 478782
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* molecular-weight:
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* centisome-position:
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** 141.169
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** 78.42483   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-9157]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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== Reaction(s) of unknown directionality ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: common-name=hypoglycin a}}
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* [[3.1.1.64-RXN]]
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{{#set: inchi-key=inchikey=oojzcxfxpzgubj-uhfffaoysa-n}}
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** Category: [[annotation]]
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{{#set: molecular-weight=141.169}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[3.1.1.73-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[CARBOXYLESTERASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RETINYL-PALMITATE-ESTERASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-10711]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-10767]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12086]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-12252]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12575]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12579]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXNQT-4366]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[TRIACYLGLYCEROL-LIPASE-RXN]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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* [[PWY-6784]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6303]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-6857]]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* [[LIPAS-PWY]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=486447}}
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{{#set: left-end-position=478782}}
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{{#set: centisome-position=78.42483    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=12}}
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{{#set: nb pathway associated=4}}

Latest revision as of 11:01, 18 March 2021

Gene SJ20895

  • transcription-direction:
    • negative
  • right-end-position:
    • 486447
  • left-end-position:
    • 478782
  • centisome-position:
    • 78.42483

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6784
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6303
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6857
    • 3 reactions found over 7 reactions in the full pathway
  • LIPAS-PWY
    • 2 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ20895&oldid=132010"