Difference between revisions of "SJ20898"
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(Created page with "Category:gene == Gene SJ12696 == * transcription-direction: ** positive * right-end-position: ** 275248 * left-end-position: ** 258930 * centisome-position: ** 72.80166...") |
(Created page with "Category:gene == Gene SJ04903 == * transcription-direction: ** negative * right-end-position: ** 34395 * left-end-position: ** 19379 * centisome-position: ** 19.692104...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ04903 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 34395 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 19379 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 19.692104 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[PHOSPHORIBULOKINASE-RXN]] |
| − | |||
| − | |||
| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | == Pathway(s) associated == |
| − | {{#set: right-end-position= | + | * [[CALVIN-PWY]] |
| − | {{#set: left-end-position= | + | ** '''12''' reactions found over '''13''' reactions in the full pathway |
| − | {{#set: centisome-position= | + | * [[PWY-5723]] |
| + | ** '''10''' reactions found over '''10''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=34395}} | ||
| + | {{#set: left-end-position=19379}} | ||
| + | {{#set: centisome-position=19.692104 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated=2}} | + | {{#set: nb reaction associated=1}} |
| + | {{#set: nb pathway associated=2}} | ||
Revision as of 11:06, 15 January 2021
Contents
Gene SJ04903
- transcription-direction:
- negative
- right-end-position:
- 34395
- left-end-position:
- 19379
- centisome-position:
- 19.692104
Organism(s) associated with this gene
Reaction(s) associated
- PHOSPHORIBULOKINASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- CALVIN-PWY
- 12 reactions found over 13 reactions in the full pathway
- PWY-5723
- 10 reactions found over 10 reactions in the full pathway
