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| | [[Category:gene]] | | [[Category:gene]] |
| − | == Gene SJ04060 == | + | == Gene SJ20928 == |
| − | * transcription-direction:
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| − | ** negative
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| − | * right-end-position:
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| − | ** 354412
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| − | * left-end-position:
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| − | ** 335957
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| − | * centisome-position:
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| − | ** 64.82553
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| | == Organism(s) associated with this gene == | | == Organism(s) associated with this gene == |
| − | * [[S.japonica_sterols_curated]] | + | * [[S.japonica_carotenoid_curated]] |
| | == Reaction(s) associated == | | == Reaction(s) associated == |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| + | * [[RR-BUTANEDIOL-DEHYDROGENASE-RXN]] |
| − | * [[RXN-12587]] | |
| − | ** Category: [[annotation]]
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| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| | ** Category: [[orthology]] | | ** Category: [[orthology]] |
| − | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a |
| − | * [[RXN-12588]]
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| − | ** Category: [[annotation]]
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| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | ** Category: [[orthology]]
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| − | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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| − | * [[RXN-14382]]
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| − | ** Category: [[annotation]]
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| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | ** Category: [[orthology]]
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| − | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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| − | * [[RXN-14384]]
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| − | ** Category: [[annotation]]
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| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | ** Category: [[orthology]]
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| − | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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| − | * [[RXN-14385]]
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| − | ** Category: [[annotation]]
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| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | ** Category: [[orthology]]
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| − | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
| |
| − | * [[RXN-14386]]
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| − | ** Category: [[annotation]]
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| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | ** Category: [[orthology]]
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| − | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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| − | * [[RXN-15881]]
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| − | ** Category: [[annotation]]
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| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | ** Category: [[orthology]]
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| − | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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| − | * [[RXN-9787]]
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| − | ** Category: [[annotation]]
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| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | ** Category: [[orthology]]
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| − | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
| |
| − | * [[RXN0-308]]
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| − | ** Category: [[annotation]]
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| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | ** Category: [[orthology]]
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| − | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
| |
| − | </div>
| |
| | == Pathway(s) associated == | | == Pathway(s) associated == |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| + | * [[PWY-5951]] |
| − | * [[PWY-6892]]
| + | ** '''1''' reactions found over '''1''' reactions in the full pathway |
| − | ** '''5''' reactions found over '''7''' reactions in the full pathway
| + | * [[PWY3O-246]] |
| − | * [[PWY-7250]]
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| − | ** '''5''' reactions found over '''10''' reactions in the full pathway
| |
| − | * [[PWY-6891]] | |
| − | ** '''4''' reactions found over '''7''' reactions in the full pathway | |
| − | * [[PWY0-1021]] | |
| | ** '''1''' reactions found over '''1''' reactions in the full pathway | | ** '''1''' reactions found over '''1''' reactions in the full pathway |
| − | * [[PWY-6823]]
| + | {{#set: organism associated=S.japonica_carotenoid_curated}} |
| − | ** '''7''' reactions found over '''8''' reactions in the full pathway
| + | {{#set: nb reaction associated=1}} |
| − | * [[PWY-7904]]
| + | {{#set: nb pathway associated=2}} |
| − | ** '''1''' reactions found over '''5''' reactions in the full pathway
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| − | * [[PWY-7892]]
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| − | ** '''3''' reactions found over '''11''' reactions in the full pathway
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| − | * [[PWY-7891]]
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| − | ** '''1''' reactions found over '''4''' reactions in the full pathway
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| − | * [[PWY-7889]]
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| − | ** '''2''' reactions found over '''4''' reactions in the full pathway
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| − | * [[PWY-7888]]
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| − | ** '''2''' reactions found over '''7''' reactions in the full pathway
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| − | </div>
| |
| − | {{#set: transcription-direction=negative}}
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| − | {{#set: right-end-position=354412}}
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| − | {{#set: left-end-position=335957}}
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| − | {{#set: centisome-position=64.82553 }}
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| − | {{#set: organism associated=S.japonica_sterols_curated}} | |
| − | {{#set: nb reaction associated=9}} | |
| − | {{#set: nb pathway associated=10}} | |
