Difference between revisions of "SJ20946"

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(Created page with "Category:gene == Gene SJ14150 == * transcription-direction: ** positive * right-end-position: ** 239295 * left-end-position: ** 216979 * centisome-position: ** 30.20061...")
(Created page with "Category:gene == Gene SJ09460 == * transcription-direction: ** negative * right-end-position: ** 40028 * left-end-position: ** 33783 * centisome-position: ** 82.629326...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ14150 ==
+
== Gene SJ09460 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 239295
+
** 40028
 
* left-end-position:
 
* left-end-position:
−
** 216979
+
** 33783
 
* centisome-position:
 
* centisome-position:
−
** 30.20061    
+
** 82.629326    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[MALSYN-RXN]]
+
* [[ATPASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[P105-PWY]]
+
* [[PWY-7210]]
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-6969]]
+
* [[PWY-7198]]
−
** '''10''' reactions found over '''12''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
* [[GLYOXYLATE-BYPASS]]
+
* [[PWY-7184]]
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7294]]
+
* [[PWY-6545]]
−
** '''1''' reactions found over '''7''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7295]]
+
{{#set: transcription-direction=negative}}
−
** '''1''' reactions found over '''8''' reactions in the full pathway
+
{{#set: right-end-position=40028}}
−
* [[PWY-7854]]
+
{{#set: left-end-position=33783}}
−
** '''1''' reactions found over '''14''' reactions in the full pathway
+
{{#set: centisome-position=82.629326   }}
−
* [[PWY-7118]]
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
{{#set: nb reaction associated=5}}
−
* [[GLYOXDEG-PWY]]
+
{{#set: nb pathway associated=4}}
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=239295}}
 
−
{{#set: left-end-position=216979}}
 
−
{{#set: centisome-position=30.20061   }}
 
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
−
{{#set: nb reaction associated=1}}
 
−
{{#set: nb pathway associated=8}}
 

Revision as of 14:53, 5 January 2021

Gene SJ09460

  • transcription-direction:
    • negative
  • right-end-position:
    • 40028
  • left-end-position:
    • 33783
  • centisome-position:
    • 82.629326

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway




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