Difference between revisions of "SJ20991"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SIROHYDROCHLORIN SIROHYDROCHLORIN] == * common-name: ** sirohydrochlorin * smiles: ** cc2(cc(=o...")
(Created page with "Category:gene == Gene SJ20991 == * transcription-direction: ** positive * right-end-position: ** 325000 * left-end-position: ** 309012 * centisome-position: ** 50.792183...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SIROHYDROCHLORIN SIROHYDROCHLORIN] ==
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== Gene SJ20991 ==
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* common-name:
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* transcription-direction:
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** sirohydrochlorin
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** positive
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* smiles:
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* right-end-position:
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** cc2(cc(=o)[o-])(c1(=cc5(=nc(=cc4(nc(c=c3(n=c(c=c(n1)c(ccc(=o)[o-])2)c(cc(=o)[o-])=c(ccc(=o)[o-])3))=c(ccc(=o)[o-])c(cc(=o)[o-])=4))c(c)(cc(=o)[o-])c(ccc(=o)[o-])5)))
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** 325000
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* inchi-key:
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* left-end-position:
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** kwizrxmmfrbuml-ahgfgahvsa-f
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** 309012
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* molecular-weight:
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* centisome-position:
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** 854.779
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** 50.792183   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[4.99.1.3-RXN]]
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* [[S.japonica_carotenoid_curated]]
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* [[SIROHEME-FERROCHELAT-RXN]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[ATPASE-RXN]]
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* [[DIMETHUROPORDEHYDROG-RXN]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=sirohydrochlorin}}
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** Category: [[orthology]]
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{{#set: inchi-key=inchikey=kwizrxmmfrbuml-ahgfgahvsa-f}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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{{#set: molecular-weight=854.779}}
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12195]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12196]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5462]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=325000}}
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{{#set: left-end-position=309012}}
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{{#set: centisome-position=50.792183    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=5}}
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{{#set: nb pathway associated=4}}

Latest revision as of 11:02, 18 March 2021

Gene SJ20991

  • transcription-direction:
    • positive
  • right-end-position:
    • 325000
  • left-end-position:
    • 309012
  • centisome-position:
    • 50.792183

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ20991&oldid=132665"