Difference between revisions of "SJ21008"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXY-N6N6N6-TRIMETHYL-L-LYSINE 3-HYDROXY-N6N6N6-TRIMETHYL-L-LYSINE] == * common-name: ** 3...")
 
(Created page with "Category:gene == Gene SJ21008 == * transcription-direction: ** positive * right-end-position: ** 60459 * left-end-position: ** 52735 * centisome-position: ** 26.204119...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:metabolite]]
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[[Category:gene]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXY-N6N6N6-TRIMETHYL-L-LYSINE 3-HYDROXY-N6N6N6-TRIMETHYL-L-LYSINE] ==
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== Gene SJ21008 ==
* common-name:
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* transcription-direction:
** 3-hydroxy-n6,n6,n6-trimethyl-l-lysine
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** positive
* smiles:
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* right-end-position:
** c[n+](cccc(c(c([o-])=o)[n+])o)(c)c
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** 60459
* inchi-key:
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* left-end-position:
** zrjhlgyvucpznh-mqwkrirwsa-o
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** 52735
* molecular-weight:
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* centisome-position:
** 205.276
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** 26.204119   
== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
* [[RXN-9896]]
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* [[S.japonica_carotenoid_curated]]
== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
* [[TRIMETHYLLYSINE-DIOXYGENASE-RXN]]
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* [[LYSINE--TRNA-LIGASE-RXN]]
== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
{{#set: common-name=3-hydroxy-n6,n6,n6-trimethyl-l-lysine}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
{{#set: inchi-key=inchikey=zrjhlgyvucpznh-mqwkrirwsa-o}}
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** Category: [[orthology]]
{{#set: molecular-weight=205.276}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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* [[TRNA-CHARGING-PWY]]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=60459}}
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{{#set: left-end-position=52735}}
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{{#set: centisome-position=26.204119    }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=1}}
 +
{{#set: nb pathway associated=1}}

Latest revision as of 11:03, 18 March 2021

Gene SJ21008

  • transcription-direction:
    • positive
  • right-end-position:
    • 60459
  • left-end-position:
    • 52735
  • centisome-position:
    • 26.204119

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated