Difference between revisions of "SJ21027"

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(Created page with "Category:gene == Gene SJ18424 == * transcription-direction: ** negative * right-end-position: ** 97427 * left-end-position: ** 89898 * centisome-position: ** 36.436226...")
(Created page with "Category:gene == Gene SJ21027 == * transcription-direction: ** negative * right-end-position: ** 157907 * left-end-position: ** 145349 * centisome-position: ** 72.496155...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ18424 ==
+
== Gene SJ21027 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 97427
+
** 157907
 
* left-end-position:
 
* left-end-position:
−
** 89898
+
** 145349
 
* centisome-position:
 
* centisome-position:
−
** 36.436226    
+
** 72.496155    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[GPPSYN-RXN]]
+
* [[TRIOSEPISOMERIZATION-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-3701]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[PWY-6383]]
+
* [[GLUCONEO-PWY]]
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''12''' reactions found over '''13''' reactions in the full pathway
−
* [[PWY-7410]]
+
* [[CALVIN-PWY]]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''12''' reactions found over '''13''' reactions in the full pathway
−
* [[PWY-7102]]
+
* [[P185-PWY]]
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
** '''11''' reactions found over '''12''' reactions in the full pathway
−
* [[PWY-6859]]
+
* [[PWY-5484]]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''10''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY-7736]]
+
* [[PWY-1042]]
−
** '''3''' reactions found over '''8''' reactions in the full pathway
+
** '''9''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-5122]]
+
* [[P341-PWY]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''6''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-7141]]
+
* [[GLYCOLYSIS]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''11''' reactions found over '''12''' reactions in the full pathway
−
* [[PWY-7659]]
+
* [[ANAGLYCOLYSIS-PWY]]
−
** '''1''' reactions found over '''9''' reactions in the full pathway
+
** '''10''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY-7709]]
+
* [[PWY66-399]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''11''' reactions found over '''12''' reactions in the full pathway
−
* [[PWY-5123]]
+
* [[PWY-6142]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''10''' reactions found over '''13''' reactions in the full pathway
−
* [[PWY-7182]]
+
* [[PWY66-373]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7003]]
 +
** '''8''' reactions found over '''6''' reactions in the full pathway
 
</div>
 
</div>
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=97427}}
+
{{#set: right-end-position=157907}}
−
{{#set: left-end-position=89898}}
+
{{#set: left-end-position=145349}}
−
{{#set: centisome-position=36.436226   }}
+
{{#set: centisome-position=72.496155   }}
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=11}}
+
{{#set: nb pathway associated=12}}

Latest revision as of 11:02, 18 March 2021

Gene SJ21027

  • transcription-direction:
    • negative
  • right-end-position:
    • 157907
  • left-end-position:
    • 145349
  • centisome-position:
    • 72.496155

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • GLUCONEO-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • CALVIN-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • P185-PWY
    • 11 reactions found over 12 reactions in the full pathway
  • PWY-5484
    • 10 reactions found over 11 reactions in the full pathway
  • PWY-1042
    • 9 reactions found over 10 reactions in the full pathway
  • P341-PWY
    • 6 reactions found over 10 reactions in the full pathway
  • GLYCOLYSIS
    • 11 reactions found over 12 reactions in the full pathway
  • ANAGLYCOLYSIS-PWY
    • 10 reactions found over 11 reactions in the full pathway
  • PWY66-399
    • 11 reactions found over 12 reactions in the full pathway
  • PWY-6142
    • 10 reactions found over 13 reactions in the full pathway
  • PWY66-373
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-7003
    • 8 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ21027&oldid=132556"