Difference between revisions of "SJ21090"

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(Created page with "Category:gene == Gene SJ08749 == * transcription-direction: ** negative * right-end-position: ** 31685 * left-end-position: ** 9850 * centisome-position: ** 19.793425...")
(Created page with "Category:gene == Gene SJ21090 == * transcription-direction: ** negative * right-end-position: ** 77638 * left-end-position: ** 69498 * centisome-position: ** 35.05008...")
 
(One intermediate revision by one other user not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ08749 ==
+
== Gene SJ21090 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 31685
+
** 77638
 
* left-end-position:
 
* left-end-position:
−
** 9850
+
** 69498
 
* centisome-position:
 
* centisome-position:
−
** 19.793425    
+
** 35.05008    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ISOCITDEH-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[3.1.3.74-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-8642]]
+
* [[INORGPYROPHOSPHAT-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14046]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14181]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-5647]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-7948]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-9951]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
</div>
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7204]]
−
* [[PWY-6549]]
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-7805]]
−
* [[PWY-7268]]
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-7807]]
−
* [[P105-PWY]]
+
** '''2''' reactions found over '''7''' reactions in the full pathway
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
* [[PWY-3385]]
−
* [[TCA]]
+
** '''2''' reactions found over '''6''' reactions in the full pathway
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[REDCITCYC]]
 
−
** '''5''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7254]]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-6969]]
 
−
** '''10''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-5913]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[FERMENTATION-PWY]]
 
−
** '''11''' reactions found over '''16''' reactions in the full pathway
 
−
* [[P23-PWY]]
 
−
** '''9''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-7124]]
 
−
** '''8''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6728]]
 
−
** '''11''' reactions found over '''19''' reactions in the full pathway
 
−
</div>
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=31685}}
+
{{#set: right-end-position=77638}}
−
{{#set: left-end-position=9850}}
+
{{#set: left-end-position=69498}}
−
{{#set: centisome-position=19.793425   }}
+
{{#set: centisome-position=35.05008   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=7}}
−
{{#set: nb pathway associated=12}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:08, 18 March 2021

Gene SJ21090

  • transcription-direction:
    • negative
  • right-end-position:
    • 77638
  • left-end-position:
    • 69498
  • centisome-position:
    • 35.05008

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7204
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7805
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-7807
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-3385
    • 2 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ21090&oldid=135421"