Difference between revisions of "SJ21107"

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(Created page with "Category:gene == Gene SJ13018 == * transcription-direction: ** negative * right-end-position: ** 236996 * left-end-position: ** 235423 * centisome-position: ** 67.83449...")
(Created page with "Category:gene == Gene SJ06043 == * transcription-direction: ** positive * right-end-position: ** 18734 * left-end-position: ** 10683 * centisome-position: ** 2.2131941...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ13018 ==
+
== Gene SJ06043 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 236996
+
** 18734
 
* left-end-position:
 
* left-end-position:
−
** 235423
+
** 10683
 
* centisome-position:
 
* centisome-position:
−
** 67.83449    
+
** 2.2131941    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ADCLY-RXN]]
+
* [[2.7.8.11-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[BRANCHED-CHAINAMINOTRANSFERILEU-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[D-ALANINE-AMINOTRANSFERASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6543]]
+
* [[PHOSLIPSYN2-PWY]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''13''' reactions found over '''3''' reactions in the full pathway
−
* [[ILEUSYN-PWY]]
+
* [[PWY-7625]]
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[ILEUDEG-PWY]]
+
* [[PWY-6351]]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-5078]]
+
* [[PWY-6352]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''5''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-5103]]
+
{{#set: transcription-direction=positive}}
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
{{#set: right-end-position=18734}}
−
* [[PWY-5104]]
+
{{#set: left-end-position=10683}}
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
{{#set: centisome-position=2.2131941   }}
−
* [[PWY-5101]]
 
−
** '''4''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5108]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=236996}}
 
−
{{#set: left-end-position=235423}}
 
−
{{#set: centisome-position=67.83449   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=8}}
+
{{#set: nb pathway associated=4}}

Revision as of 08:13, 15 March 2021

Gene SJ06043

  • transcription-direction:
    • positive
  • right-end-position:
    • 18734
  • left-end-position:
    • 10683
  • centisome-position:
    • 2.2131941

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PHOSLIPSYN2-PWY
    • 13 reactions found over 3 reactions in the full pathway
  • PWY-7625
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6351
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6352
    • 5 reactions found over 8 reactions in the full pathway




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