Difference between revisions of "SJ21158"

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(Created page with "Category:gene == Gene SJ02910 == * transcription-direction: ** positive * right-end-position: ** 195815 * left-end-position: ** 180581 * centisome-position: ** 34.00202...")
(Created page with "Category:gene == Gene SJ21158 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * CARBODEHYDRAT-RXN ** C...")
 
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[[Category:gene]]
 
[[Category:gene]]
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== Gene SJ02910 ==
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== Gene SJ21158 ==
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* transcription-direction:
 
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** positive
 
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* right-end-position:
 
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** 195815
 
−
* left-end-position:
 
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** 180581
 
−
* centisome-position:
 
−
** 34.00202   
 
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[CARBODEHYDRAT-RXN]]
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* [[2.7.8.15-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[2.7.8.17-RXN]]
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* [[RXN0-5224]]
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[PHOSNACMURPENTATRANS-RXN]]
 
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** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-11347]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[RXN-8975]]
 
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** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]]
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* [[PWY-7115]]
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** '''16''' reactions found over '''19''' reactions in the full pathway
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** '''9''' reactions found over '''11''' reactions in the full pathway
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* [[PEPTIDOGLYCANSYN-PWY]]
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* [[PWY-7117]]
 +
** '''10''' reactions found over '''14''' reactions in the full pathway
 +
* [[PWY-6142]]
 +
** '''10''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-5744]]
 +
** '''4''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWYQT-4429]]
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6470]]
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* [[CYANCAT-PWY]]
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** '''2''' reactions found over '''9''' reactions in the full pathway
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6471]]
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* [[PWY-5789]]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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** '''8''' reactions found over '''18''' reactions in the full pathway
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* [[PWY-5265]]
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* [[PWY-5743]]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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** '''5''' reactions found over '''13''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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* [[PWY-241]]
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{{#set: right-end-position=195815}}
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** '''5''' reactions found over '''7''' reactions in the full pathway
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{{#set: left-end-position=180581}}
 
−
{{#set: centisome-position=34.00202    }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=9}}

Latest revision as of 11:08, 18 March 2021

Gene SJ21158

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7115
    • 9 reactions found over 11 reactions in the full pathway
  • PWY-7117
    • 10 reactions found over 14 reactions in the full pathway
  • PWY-6142
    • 10 reactions found over 13 reactions in the full pathway
  • PWY-5744
    • 4 reactions found over 13 reactions in the full pathway
  • PWYQT-4429
    • 2 reactions found over 2 reactions in the full pathway
  • CYANCAT-PWY
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5789
    • 8 reactions found over 18 reactions in the full pathway
  • PWY-5743
    • 5 reactions found over 13 reactions in the full pathway
  • PWY-241
    • 5 reactions found over 7 reactions in the full pathway


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