Difference between revisions of "SJ21215"

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(Created page with "Category:gene == Gene SJ21099 == * transcription-direction: ** negative * right-end-position: ** 19795 * left-end-position: ** 12060 * centisome-position: ** 6.091555...")
(Created page with "Category:gene == Gene SJ21215 == * transcription-direction: ** negative * right-end-position: ** 394354 * left-end-position: ** 382280 * centisome-position: ** 63.617165...")
 
(One intermediate revision by the same user not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ21099 ==
+
== Gene SJ21215 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 19795
+
** 394354
 
* left-end-position:
 
* left-end-position:
−
** 12060
+
** 382280
 
* centisome-position:
 
* centisome-position:
−
** 6.091555    
+
** 63.617165    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
−
* [[ADENYL-KIN-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-11832]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[ALKAPHOSPHA-RXN]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12002]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-5822]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-7913]]
+
* [[RXN-8748]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7219]]
+
* [[NADPHOS-DEPHOS-PWY]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5083]]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[NAD-BIOSYNTHESIS-II]]
 
** '''4''' reactions found over '''3''' reactions in the full pathway
 
** '''4''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7205]]
+
* [[PWY-5491]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7176]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7197]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=19795}}
+
{{#set: right-end-position=394354}}
−
{{#set: left-end-position=12060}}
+
{{#set: left-end-position=382280}}
−
{{#set: centisome-position=6.091555   }}
+
{{#set: centisome-position=63.617165   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=4}}
 
{{#set: nb reaction associated=4}}
 
{{#set: nb pathway associated=4}}
 
{{#set: nb pathway associated=4}}

Latest revision as of 11:09, 18 March 2021

Gene SJ21215

  • transcription-direction:
    • negative
  • right-end-position:
    • 394354
  • left-end-position:
    • 382280
  • centisome-position:
    • 63.617165

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • NADPHOS-DEPHOS-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5083
    • 5 reactions found over 6 reactions in the full pathway
  • NAD-BIOSYNTHESIS-II
    • 4 reactions found over 3 reactions in the full pathway
  • PWY-5491
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ21215&oldid=136005"