Difference between revisions of "SJ21233"

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(Created page with "Category:gene == Gene SJ03419 == * transcription-direction: ** positive * right-end-position: ** 61954 * left-end-position: ** 47501 * centisome-position: ** 39.162838...")
(Created page with "Category:gene == Gene SJ18547 == * transcription-direction: ** negative * right-end-position: ** 133998 * left-end-position: ** 110390 * centisome-position: ** 45.48807...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ03419 ==
+
== Gene SJ18547 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 61954
+
** 133998
 
* left-end-position:
 
* left-end-position:
−
** 47501
+
** 110390
 
* centisome-position:
 
* centisome-position:
−
** 39.162838    
+
** 45.48807    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[L-GLN-FRUCT-6-P-AMINOTRANS-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[3.1.1.64-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[CARBOXYLESTERASE-RXN]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10711]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10767]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12252]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12575]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXNQT-4366]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[UDPNACETYLGALSYN-PWY]]
+
* [[PWY-6303]]
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[UDPNAGSYN-PWY]]
+
* [[PWY-6857]]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-6749]]
+
{{#set: transcription-direction=negative}}
−
** '''1''' reactions found over '''10''' reactions in the full pathway
+
{{#set: right-end-position=133998}}
−
{{#set: transcription-direction=positive}}
+
{{#set: left-end-position=110390}}
−
{{#set: right-end-position=61954}}
+
{{#set: centisome-position=45.48807   }}
−
{{#set: left-end-position=47501}}
 
−
{{#set: centisome-position=39.162838   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=8}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=2}}

Revision as of 13:02, 14 January 2021

Gene SJ18547

  • transcription-direction:
    • negative
  • right-end-position:
    • 133998
  • left-end-position:
    • 110390
  • centisome-position:
    • 45.48807

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6303
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6857
    • 3 reactions found over 7 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ21233&oldid=82196"