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| Line 1: |
Line 1: |
| | [[Category:gene]] | | [[Category:gene]] |
| − | == Gene SJ09312 == | + | == Gene SJ22513 == |
| − | * transcription-direction:
| |
| − | ** positive
| |
| − | * right-end-position:
| |
| − | ** 248837
| |
| − | * left-end-position:
| |
| − | ** 224166
| |
| − | * centisome-position:
| |
| − | ** 53.554813
| |
| | == Organism(s) associated with this gene == | | == Organism(s) associated with this gene == |
| − | * [[S.japonica_carotenoid_curated]] | + | * [[S.japonica_sterols_curated]] |
| | == Reaction(s) associated == | | == Reaction(s) associated == |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| + | * [[1.5.1.9-RXN]] |
| − | * [[PDHam2hi]]
| |
| − | ** Category: [[orthology]]
| |
| − | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
| |
| − | * [[PYFLAVOXRE-RXN]]
| |
| − | ** Category: [[orthology]]
| |
| − | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
| |
| − | * [[PYRUFLAVREDUCT-RXN]]
| |
| − | ** Category: [[orthology]]
| |
| − | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
| |
| − | * [[PYRUVDEH-RXN]]
| |
| − | ** Category: [[orthology]]
| |
| − | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
| |
| − | * [[RXN-12508]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
| |
| − | * [[RXN-12583]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
| |
| − | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
| |
| − | * [[RXN0-1134]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| | ** Category: [[orthology]] | | ** Category: [[orthology]] |
| | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | </div>
| |
| | == Pathway(s) associated == | | == Pathway(s) associated == |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| + | * [[LYSINE-DEG1-PWY]] |
| − | * [[NPGLUCAT-PWY]]
| |
| − | ** '''4''' reactions found over '''9''' reactions in the full pathway
| |
| − | * [[PWY-5493]]
| |
| − | ** '''1''' reactions found over '''2''' reactions in the full pathway
| |
| − | * [[PWY-6863]]
| |
| − | ** '''9''' reactions found over '''11''' reactions in the full pathway
| |
| − | * [[PWY-6587]]
| |
| − | ** '''2''' reactions found over '''3''' reactions in the full pathway
| |
| − | * [[PWY-6588]]
| |
| − | ** '''2''' reactions found over '''5''' reactions in the full pathway
| |
| − | * [[PWY-5497]]
| |
| − | ** '''10''' reactions found over '''24''' reactions in the full pathway
| |
| − | * [[PWY-6583]]
| |
| − | ** '''6''' reactions found over '''8''' reactions in the full pathway
| |
| − | * [[PWY-5483]]
| |
| − | ** '''1''' reactions found over '''2''' reactions in the full pathway
| |
| − | * [[CENTFERM-PWY]] | |
| − | ** '''5''' reactions found over '''7''' reactions in the full pathway
| |
| − | * [[P42-PWY]]
| |
| − | ** '''5''' reactions found over '''7''' reactions in the full pathway
| |
| − | * [[PWY-5392]]
| |
| − | ** '''6''' reactions found over '''12''' reactions in the full pathway
| |
| − | * [[P142-PWY]]
| |
| − | ** '''2''' reactions found over '''1''' reactions in the full pathway
| |
| − | * [[GLUDEG-II-PWY]]
| |
| − | ** '''3''' reactions found over '''2''' reactions in the full pathway
| |
| − | * [[PWY-6142]]
| |
| − | ** '''10''' reactions found over '''13''' reactions in the full pathway
| |
| − | * [[PWY-5538]]
| |
| − | ** '''2''' reactions found over '''2''' reactions in the full pathway
| |
| − | * [[P23-PWY]]
| |
| − | ** '''9''' reactions found over '''12''' reactions in the full pathway
| |
| − | * [[PWY-6876]]
| |
| | ** '''2''' reactions found over '''5''' reactions in the full pathway | | ** '''2''' reactions found over '''5''' reactions in the full pathway |
| − | * [[PWY-5600]]
| + | {{#set: organism associated=S.japonica_sterols_curated}} |
| − | ** '''2''' reactions found over '''1''' reactions in the full pathway
| + | {{#set: nb reaction associated=1}} |
| − | * [[PWY-7384]]
| + | {{#set: nb pathway associated=1}} |
| − | ** '''6''' reactions found over '''10''' reactions in the full pathway
| |
| − | * [[GLYCOLYSIS-TCA-GLYOX-BYPASS]]
| |
| − | ** '''3''' reactions found over '''1''' reactions in the full pathway
| |
| − | * [[PWY-7218]]
| |
| − | ** '''7''' reactions found over '''4''' reactions in the full pathway
| |
| − | * [[PWY-5482]]
| |
| − | ** '''2''' reactions found over '''3''' reactions in the full pathway
| |
| − | * [[PWY-5537]]
| |
| − | ** '''2''' reactions found over '''2''' reactions in the full pathway
| |
| − | * [[PWY-6886]]
| |
| − | ** '''8''' reactions found over '''5''' reactions in the full pathway
| |
| − | * [[PYRUVDEHYD-PWY]]
| |
| − | ** '''3''' reactions found over '''3''' reactions in the full pathway
| |
| − | </div>
| |
| − | {{#set: transcription-direction=positive}}
| |
| − | {{#set: right-end-position=248837}}
| |
| − | {{#set: left-end-position=224166}}
| |
| − | {{#set: centisome-position=53.554813 }}
| |
| − | {{#set: organism associated=S.japonica_carotenoid_curated}} | |
| − | {{#set: nb reaction associated=7}} | |
| − | {{#set: nb pathway associated=25}} | |
