Difference between revisions of "SJ21294"
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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-19159 CPD-19159] == * common-name: ** (s)-3-hydroxy-(11z)-octadecenoyl-coa * smiles: ** ccc...") |
(Created page with "Category:gene == Gene SJ21294 == * transcription-direction: ** positive * right-end-position: ** 170545 * left-end-position: ** 137602 * centisome-position: ** 70.67531...") |
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− | [[Category: | + | [[Category:gene]] |
− | == | + | == Gene SJ21294 == |
− | * | + | * transcription-direction: |
− | ** | + | ** positive |
− | * | + | * right-end-position: |
− | ** | + | ** 170545 |
− | * | + | * left-end-position: |
− | ** | + | ** 137602 |
− | * | + | * centisome-position: |
− | ** | + | ** 70.67531 |
− | == | + | == Organism(s) associated with this gene == |
− | * [[ | + | * [[S.japonica_carotenoid_curated]] |
− | + | == Reaction(s) associated == | |
− | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | + | * [[D-LACTATE-DEHYDROGENASE-CYTOCHROME-RXN]] | |
− | {{#set: | + | ** Category: [[annotation]] |
− | {{#set: | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
− | {{#set: | + | * [[DLACTDEHYDROGNAD-RXN]] |
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[GLYCOLATEDEHYDRO-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RR-BUTANEDIOL-DEHYDROGENASE-RXN]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[RXN-969]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN0-7229]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[S-2-HYDROXY-ACID-OXIDASE-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[UDPNACETYLMURAMATEDEHYDROG-RXN]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | </div> | ||
+ | == Pathway(s) associated == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * [[MGLDLCTANA-PWY]] | ||
+ | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[P122-PWY]] | ||
+ | ** '''16''' reactions found over '''18''' reactions in the full pathway | ||
+ | * [[FERMENTATION-PWY]] | ||
+ | ** '''11''' reactions found over '''16''' reactions in the full pathway | ||
+ | * [[PWY4LZ-257]] | ||
+ | ** '''7''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-6454]] | ||
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-6901]] | ||
+ | ** '''10''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[ALACAT2-PWY]] | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-6649]] | ||
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[GLYOXDEG-PWY]] | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[GLYCOLATEMET-PWY]] | ||
+ | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-5951]] | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[PWY3O-246]] | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[PWY-181]] | ||
+ | ** '''5''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-6387]] | ||
+ | ** '''2''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY0-1261]] | ||
+ | ** '''3''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[PWY-7953]] | ||
+ | ** '''2''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-6386]] | ||
+ | ** '''2''' reactions found over '''8''' reactions in the full pathway | ||
+ | </div> | ||
+ | {{#set: transcription-direction=positive}} | ||
+ | {{#set: right-end-position=170545}} | ||
+ | {{#set: left-end-position=137602}} | ||
+ | {{#set: centisome-position=70.67531 }} | ||
+ | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
+ | {{#set: nb reaction associated=8}} | ||
+ | {{#set: nb pathway associated=17}} |
Latest revision as of 11:04, 18 March 2021
Contents
Gene SJ21294
- transcription-direction:
- positive
- right-end-position:
- 170545
- left-end-position:
- 137602
- centisome-position:
- 70.67531
Organism(s) associated with this gene
Reaction(s) associated
- D-LACTATE-DEHYDROGENASE-CYTOCHROME-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- DLACTDEHYDROGNAD-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- GLYCOLATEDEHYDRO-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RR-BUTANEDIOL-DEHYDROGENASE-RXN
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-969
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-7229
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- S-2-HYDROXY-ACID-OXIDASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- UDPNACETYLMURAMATEDEHYDROG-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- MGLDLCTANA-PWY
- 2 reactions found over 4 reactions in the full pathway
- P122-PWY
- 16 reactions found over 18 reactions in the full pathway
- FERMENTATION-PWY
- 11 reactions found over 16 reactions in the full pathway
- PWY4LZ-257
- 7 reactions found over 7 reactions in the full pathway
- PWY-6454
- 1 reactions found over 3 reactions in the full pathway
- PWY-6901
- 10 reactions found over 8 reactions in the full pathway
- ALACAT2-PWY
- 3 reactions found over 3 reactions in the full pathway
- PWY-6649
- 1 reactions found over 3 reactions in the full pathway
- GLYOXDEG-PWY
- 2 reactions found over 2 reactions in the full pathway
- GLYCOLATEMET-PWY
- 2 reactions found over 4 reactions in the full pathway
- PWY-5951
- 1 reactions found over 1 reactions in the full pathway
- PWY3O-246
- 1 reactions found over 1 reactions in the full pathway
- PWY-181
- 5 reactions found over 9 reactions in the full pathway
- PWY-6387
- 2 reactions found over 8 reactions in the full pathway
- PWY0-1261
- 3 reactions found over 12 reactions in the full pathway
- PWY-7953
- 2 reactions found over 8 reactions in the full pathway
- PWY-6386
- 2 reactions found over 8 reactions in the full pathway