Difference between revisions of "SJ21294"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-19159 CPD-19159] == * common-name: ** (s)-3-hydroxy-(11z)-octadecenoyl-coa * smiles: ** ccc...")
(Created page with "Category:gene == Gene SJ21294 == * transcription-direction: ** positive * right-end-position: ** 170545 * left-end-position: ** 137602 * centisome-position: ** 70.67531...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-19159 CPD-19159] ==
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== Gene SJ21294 ==
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* common-name:
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* transcription-direction:
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** (s)-3-hydroxy-(11z)-octadecenoyl-coa
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** positive
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* smiles:
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* right-end-position:
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** ccccccc=ccccccccc(o)cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
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** 170545
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* inchi-key:
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* left-end-position:
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** scdxbwnpjageek-kboaxvdlsa-j
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** 137602
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* molecular-weight:
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* centisome-position:
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** 1043.952
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** 70.67531   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-17786]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-17785]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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== Reaction(s) of unknown directionality ==
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* [[D-LACTATE-DEHYDROGENASE-CYTOCHROME-RXN]]
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{{#set: common-name=(s)-3-hydroxy-(11z)-octadecenoyl-coa}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=scdxbwnpjageek-kboaxvdlsa-j}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=1043.952}}
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* [[DLACTDEHYDROGNAD-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[GLYCOLATEDEHYDRO-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RR-BUTANEDIOL-DEHYDROGENASE-RXN]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-969]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-7229]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[S-2-HYDROXY-ACID-OXIDASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[UDPNACETYLMURAMATEDEHYDROG-RXN]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[MGLDLCTANA-PWY]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[P122-PWY]]
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** '''16''' reactions found over '''18''' reactions in the full pathway
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* [[FERMENTATION-PWY]]
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** '''11''' reactions found over '''16''' reactions in the full pathway
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* [[PWY4LZ-257]]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6454]]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6901]]
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** '''10''' reactions found over '''8''' reactions in the full pathway
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* [[ALACAT2-PWY]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6649]]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[GLYOXDEG-PWY]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[GLYCOLATEMET-PWY]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5951]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY3O-246]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-181]]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6387]]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* [[PWY0-1261]]
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** '''3''' reactions found over '''12''' reactions in the full pathway
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* [[PWY-7953]]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-6386]]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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</div>
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=170545}}
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{{#set: left-end-position=137602}}
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{{#set: centisome-position=70.67531    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=8}}
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{{#set: nb pathway associated=17}}

Latest revision as of 11:04, 18 March 2021

Gene SJ21294

  • transcription-direction:
    • positive
  • right-end-position:
    • 170545
  • left-end-position:
    • 137602
  • centisome-position:
    • 70.67531

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • MGLDLCTANA-PWY
    • 2 reactions found over 4 reactions in the full pathway
  • P122-PWY
    • 16 reactions found over 18 reactions in the full pathway
  • FERMENTATION-PWY
    • 11 reactions found over 16 reactions in the full pathway
  • PWY4LZ-257
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-6454
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6901
    • 10 reactions found over 8 reactions in the full pathway
  • ALACAT2-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6649
    • 1 reactions found over 3 reactions in the full pathway
  • GLYOXDEG-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • GLYCOLATEMET-PWY
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-5951
    • 1 reactions found over 1 reactions in the full pathway
  • PWY3O-246
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-181
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-6387
    • 2 reactions found over 8 reactions in the full pathway
  • PWY0-1261
    • 3 reactions found over 12 reactions in the full pathway
  • PWY-7953
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-6386
    • 2 reactions found over 8 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ21294&oldid=133214"