Difference between revisions of "SJ21325"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14594 CPD-14594] == * common-name: ** linustatin * smiles: ** cc(oc2(oc(coc1(oc(co)c(o)c(o)...")
(Created page with "Category:gene == Gene SJ21325 == * transcription-direction: ** positive * right-end-position: ** 461644 * left-end-position: ** 453296 * centisome-position: ** 75.48982...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14594 CPD-14594] ==
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== Gene SJ21325 ==
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* common-name:
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* transcription-direction:
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** linustatin
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** positive
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* smiles:
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* right-end-position:
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** cc(oc2(oc(coc1(oc(co)c(o)c(o)c(o)1))c(o)c(o)c(o)2))(c#n)c
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** 461644
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* inchi-key:
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* left-end-position:
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** fersmfqbwvbkqk-cxttvelosa-n
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** 453296
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* molecular-weight:
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* centisome-position:
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** 409.389
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** 75.48982   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-13602]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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== Reaction(s) of unknown directionality ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: common-name=linustatin}}
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* [[4-NITROPHENYLPHOSPHATASE-RXN]]
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{{#set: inchi-key=inchikey=fersmfqbwvbkqk-cxttvelosa-n}}
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** Category: [[annotation]]
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{{#set: molecular-weight=409.389}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN1G-1435]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN1G-1436]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN1G-1437]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN1G-1438]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN1G-1439]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[TREHALOSEPHOSPHA-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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* [[PWYG-321]]
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** '''26''' reactions found over '''205''' reactions in the full pathway
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* [[TRESYN-PWY]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7900]]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-881]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[TREHALOSESYN-PWY]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=461644}}
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{{#set: left-end-position=453296}}
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{{#set: centisome-position=75.48982    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=7}}
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{{#set: nb pathway associated=5}}

Latest revision as of 11:03, 18 March 2021

Gene SJ21325

  • transcription-direction:
    • positive
  • right-end-position:
    • 461644
  • left-end-position:
    • 453296
  • centisome-position:
    • 75.48982

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWYG-321
    • 26 reactions found over 205 reactions in the full pathway
  • TRESYN-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7900
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-881
    • 1 reactions found over 2 reactions in the full pathway
  • TREHALOSESYN-PWY
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ21325&oldid=132862"