Difference between revisions of "SJ21359"

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(Created page with "Category:gene == Gene SJ16191 == * transcription-direction: ** negative * right-end-position: ** 85772 * left-end-position: ** 78898 * centisome-position: ** 27.566376...")
(Created page with "Category:gene == Gene SJ21359 == * transcription-direction: ** positive * right-end-position: ** 154882 * left-end-position: ** 139468 * centisome-position: ** 71.81151...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16191 ==
+
== Gene SJ21359 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 85772
+
** 154882
 
* left-end-position:
 
* left-end-position:
−
** 78898
+
** 139468
 
* centisome-position:
 
* centisome-position:
−
** 27.566376    
+
** 71.81151    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[1.8.5.1-RXN]]
+
* [[DIAMINOPIMDECARB-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[GSHTRAN-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[GST-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-13673]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-15680]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6370]]
+
* [[PWY-2942]]
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-2261]]
+
* [[PWY-5097]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''7''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-6842]]
+
* [[DAPLYSINESYN-PWY]]
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
** '''7''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-4061]]
+
* [[PWY-2941]]
−
** '''4''' reactions found over '''8''' reactions in the full pathway
+
** '''6''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7112]]
+
{{#set: transcription-direction=positive}}
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
{{#set: right-end-position=154882}}
−
* [[PWY-7533]]
+
{{#set: left-end-position=139468}}
−
** '''3''' reactions found over '''9''' reactions in the full pathway
+
{{#set: centisome-position=71.81151   }}
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=85772}}
 
−
{{#set: left-end-position=78898}}
 
−
{{#set: centisome-position=27.566376   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:03, 18 March 2021

Gene SJ21359

  • transcription-direction:
    • positive
  • right-end-position:
    • 154882
  • left-end-position:
    • 139468
  • centisome-position:
    • 71.81151

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-2942
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-5097
    • 7 reactions found over 7 reactions in the full pathway
  • DAPLYSINESYN-PWY
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-2941
    • 6 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ21359&oldid=132907"