Difference between revisions of "SJ21389"

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(Created page with "Category:gene == Gene SJ10760 == * transcription-direction: ** negative * right-end-position: ** 135613 * left-end-position: ** 131156 * centisome-position: ** 34.09545...")
(Created page with "Category:gene == Gene SJ21389 == * transcription-direction: ** positive * right-end-position: ** 75058 * left-end-position: ** 64341 * centisome-position: ** 33.183937...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ10760 ==
+
== Gene SJ21389 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 135613
+
** 75058
 
* left-end-position:
 
* left-end-position:
−
** 131156
+
** 64341
 
* centisome-position:
 
* centisome-position:
−
** 34.09545    
+
** 33.183937    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-15556]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
+
* [[PHOSPHATIDATE-PHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-11277]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16030]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16121]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17730]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7511]]
+
* [[TRIGLSYN-PWY]]
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
** '''5''' reactions found over '''7''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-7039]]
−
{{#set: right-end-position=135613}}
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
{{#set: left-end-position=131156}}
+
* [[PWY-6453]]
−
{{#set: centisome-position=34.09545   }}
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
* [[PWY-7782]]
−
{{#set: nb reaction associated=2}}
+
** '''11''' reactions found over '''16''' reactions in the full pathway
−
{{#set: nb pathway associated=1}}
+
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=75058}}
 +
{{#set: left-end-position=64341}}
 +
{{#set: centisome-position=33.183937   }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=6}}
 +
{{#set: nb pathway associated=4}}

Latest revision as of 11:04, 18 March 2021

Gene SJ21389

  • transcription-direction:
    • positive
  • right-end-position:
    • 75058
  • left-end-position:
    • 64341
  • centisome-position:
    • 33.183937

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • TRIGLSYN-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-7039
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6453
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-7782
    • 11 reactions found over 16 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ21389&oldid=133246"