Difference between revisions of "SJ21587"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=OXALO-SUCCINATE OXALO-SUCCINATE] == * common-name: ** oxalosuccinate * smiles: ** c(c([o-])=o)c...")
 
(Created page with "Category:gene == Gene SJ21587 == * transcription-direction: ** negative * right-end-position: ** 176572 * left-end-position: ** 173023 * centisome-position: ** 91.00918...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=OXALO-SUCCINATE OXALO-SUCCINATE] ==
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== Gene SJ21587 ==
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* common-name:
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* transcription-direction:
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** oxalosuccinate
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** negative
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* smiles:
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* right-end-position:
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** c(c([o-])=o)c(c(c(=o)[o-])=o)c([o-])=o
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** 176572
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* inchi-key:
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* left-end-position:
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** ufscuaxltrfidc-uhfffaoysa-k
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** 173023
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* molecular-weight:
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* centisome-position:
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** 187.085
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** 91.00918   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-8642]]
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-9951]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[RXN-8642]]
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* [[3.6.3.44-RXN]]
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* [[RXN-9951]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=oxalosuccinate}}
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* [[ATPASE-RXN]]
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{{#set: inchi-key=inchikey=ufscuaxltrfidc-uhfffaoysa-k}}
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** Category: [[annotation]]
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{{#set: molecular-weight=187.085}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12195]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12196]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5462]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[TRANS-RXN-311]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=176572}}
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{{#set: left-end-position=173023}}
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{{#set: centisome-position=91.00918    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=7}}
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{{#set: nb pathway associated=4}}

Latest revision as of 11:02, 18 March 2021

Gene SJ21587

  • transcription-direction:
    • negative
  • right-end-position:
    • 176572
  • left-end-position:
    • 173023
  • centisome-position:
    • 91.00918

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ21587&oldid=132383"