Difference between revisions of "SJ21676"

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(Created page with "Category:gene == Gene SJ03726 == * transcription-direction: ** negative * right-end-position: ** 377568 * left-end-position: ** 361674 * centisome-position: ** 69.56674...")
(Created page with "Category:gene == Gene SJ21676 == * transcription-direction: ** positive * right-end-position: ** 88251 * left-end-position: ** 68615 * centisome-position: ** 6.065645...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ03726 ==
+
== Gene SJ21676 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 377568
+
** 88251
 
* left-end-position:
 
* left-end-position:
−
** 361674
+
** 68615
 
* centisome-position:
 
* centisome-position:
−
** 69.56674    
+
** 6.065645    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-15561]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
+
* [[PHOSPHATIDATE-PHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16030]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16121]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17730]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7511]]
+
* [[TRIGLSYN-PWY]]
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
** '''5''' reactions found over '''7''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-6453]]
−
{{#set: right-end-position=377568}}
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
{{#set: left-end-position=361674}}
+
* [[PWY-7782]]
−
{{#set: centisome-position=69.56674   }}
+
** '''11''' reactions found over '''16''' reactions in the full pathway
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
{{#set: transcription-direction=positive}}
−
{{#set: nb reaction associated=2}}
+
{{#set: right-end-position=88251}}
−
{{#set: nb pathway associated=1}}
+
{{#set: left-end-position=68615}}
 +
{{#set: centisome-position=6.065645   }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=5}}
 +
{{#set: nb pathway associated=3}}

Latest revision as of 11:10, 18 March 2021

Gene SJ21676

  • transcription-direction:
    • positive
  • right-end-position:
    • 88251
  • left-end-position:
    • 68615
  • centisome-position:
    • 6.065645

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • TRIGLSYN-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-6453
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-7782
    • 11 reactions found over 16 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ21676&oldid=136240"