Difference between revisions of "SJ21682"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ12700 == * transcription-direction: ** positive * right-end-position: ** 349973 * left-end-position: ** 345234 * centisome-position: ** 97.067184...")
(Created page with "Category:gene == Gene SJ07132 == * transcription-direction: ** negative * right-end-position: ** 84492 * left-end-position: ** 77822 * centisome-position: ** 16.760279...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ12700 ==
+
== Gene SJ07132 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 349973
+
** 84492
 
* left-end-position:
 
* left-end-position:
−
** 345234
+
** 77822
 
* centisome-position:
 
* centisome-position:
−
** 97.067184    
+
** 16.760279    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[GLUTAMATE-SYNTHASE-FERREDOXIN-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[6.3.4.10-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[6.3.4.11-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[6.3.4.9-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[BIOTINLIG-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-13037]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[GLUTAMIN-RXN]]
+
* [[RXN0-7192]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-12878]]
+
* [[RXN0-947]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6549]]
+
* [[PWY0-1264]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-4341]]
+
* [[PWY-7382]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''4''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-6964]]
+
* [[PWY-6987]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY0-501]]
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[CITRULBIO-PWY]]
+
{{#set: transcription-direction=negative}}
−
** '''7''' reactions found over '''8''' reactions in the full pathway
+
{{#set: right-end-position=84492}}
−
* [[GLUTAMINDEG-PWY]]
+
{{#set: left-end-position=77822}}
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
{{#set: centisome-position=16.760279   }}
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=349973}}
 
−
{{#set: left-end-position=345234}}
 
−
{{#set: centisome-position=97.067184   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=7}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=4}}

Revision as of 08:22, 15 March 2021

Gene SJ07132

  • transcription-direction:
    • negative
  • right-end-position:
    • 84492
  • left-end-position:
    • 77822
  • centisome-position:
    • 16.760279

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY0-1264
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7382
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-6987
    • 2 reactions found over 3 reactions in the full pathway
  • PWY0-501
    • 2 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ21682&oldid=122782"