Difference between revisions of "SJ21685"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17275 CPD-17275] == * common-name: ** 7-oxolithocholate * smiles: ** cc([ch]3(cc[ch]4([ch]2...")
(Created page with "Category:gene == Gene SJ21685 == * transcription-direction: ** negative * right-end-position: ** 595604 * left-end-position: ** 592481 * centisome-position: ** 52.376003...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17275 CPD-17275] ==
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== Gene SJ21685 ==
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* common-name:
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* transcription-direction:
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** 7-oxolithocholate
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** negative
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* smiles:
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* right-end-position:
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** cc([ch]3(cc[ch]4([ch]2(c(=o)c[ch]1(cc(o)ccc(c)1[ch]2ccc(c)34)))))ccc(=o)[o-]
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** 595604
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* inchi-key:
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* left-end-position:
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** dxocdbgwdzayrq-aurdafmxsa-m
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** 592481
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* molecular-weight:
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* centisome-position:
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** 389.554
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** 52.376003   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to produce the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-16033]]
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== Reaction(s) associated ==
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== Reaction(s) of unknown directionality ==
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* [[3PGAREARR-RXN]]
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{{#set: common-name=7-oxolithocholate}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=dxocdbgwdzayrq-aurdafmxsa-m}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=389.554}}
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* [[RXN-15509]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-15510]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-15511]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-15512]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-15513]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PWY-6142]]
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** '''10''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-7003]]
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** '''8''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7218]]
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** '''7''' reactions found over '''4''' reactions in the full pathway
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* [[GLYCOLYSIS]]
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** '''11''' reactions found over '''12''' reactions in the full pathway
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* [[P341-PWY]]
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** '''6''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-5723]]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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* [[P124-PWY]]
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** '''12''' reactions found over '''15''' reactions in the full pathway
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* [[PWY-2221]]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-5484]]
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** '''10''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-1042]]
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** '''9''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-6886]]
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** '''8''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6901]]
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** '''10''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7124]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[GLUCONEO-PWY]]
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** '''12''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-6405]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-1622]]
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** '''6''' reactions found over '''13''' reactions in the full pathway
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* [[ANAGLYCOLYSIS-PWY]]
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** '''10''' reactions found over '''11''' reactions in the full pathway
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* [[PWY66-399]]
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** '''11''' reactions found over '''12''' reactions in the full pathway
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* [[P122-PWY]]
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** '''16''' reactions found over '''18''' reactions in the full pathway
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</div>
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=595604}}
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{{#set: left-end-position=592481}}
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{{#set: centisome-position=52.376003    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=6}}
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{{#set: nb pathway associated=19}}

Latest revision as of 11:02, 18 March 2021

Gene SJ21685

  • transcription-direction:
    • negative
  • right-end-position:
    • 595604
  • left-end-position:
    • 592481
  • centisome-position:
    • 52.376003

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6142
    • 10 reactions found over 13 reactions in the full pathway
  • PWY-7003
    • 8 reactions found over 6 reactions in the full pathway
  • PWY-7218
    • 7 reactions found over 4 reactions in the full pathway
  • GLYCOLYSIS
    • 11 reactions found over 12 reactions in the full pathway
  • P341-PWY
    • 6 reactions found over 10 reactions in the full pathway
  • PWY-5723
    • 10 reactions found over 10 reactions in the full pathway
  • P124-PWY
    • 12 reactions found over 15 reactions in the full pathway
  • PWY-2221
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-5484
    • 10 reactions found over 11 reactions in the full pathway
  • PWY-1042
    • 9 reactions found over 10 reactions in the full pathway
  • PWY-6886
    • 8 reactions found over 5 reactions in the full pathway
  • PWY-6901
    • 10 reactions found over 8 reactions in the full pathway
  • PWY-7124
    • 8 reactions found over 8 reactions in the full pathway
  • GLUCONEO-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • PWY-6405
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-1622
    • 6 reactions found over 13 reactions in the full pathway
  • ANAGLYCOLYSIS-PWY
    • 10 reactions found over 11 reactions in the full pathway
  • PWY66-399
    • 11 reactions found over 12 reactions in the full pathway
  • P122-PWY
    • 16 reactions found over 18 reactions in the full pathway




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