Difference between revisions of "SJ21705"

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(Created page with "Category:gene == Gene SJ00484 == * transcription-direction: ** positive * right-end-position: ** 97905 * left-end-position: ** 80034 * centisome-position: ** 48.075397...")
(Created page with "Category:gene == Gene SJ05842 == * transcription-direction: ** negative * right-end-position: ** 35399 * left-end-position: ** 27124 * centisome-position: ** 31.020838...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ00484 ==
+
== Gene SJ05842 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 97905
+
** 35399
 
* left-end-position:
 
* left-end-position:
** 80034
+
** 27124
 
* centisome-position:
 
* centisome-position:
** 48.075397    
+
** 31.020838    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
+
* [[2-ACYLGLYCEROL-O-ACYLTRANSFERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
+
* [[DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN]]
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN0-5055]]
+
* [[RXN-15090]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-7388]]
+
* [[TRIGLSYN-PWY]]
** '''7''' reactions found over '''11''' reactions in the full pathway
+
** '''5''' reactions found over '''7''' reactions in the full pathway
* [[PWY-6679]]
+
* [[PWY-7420]]
** '''1''' reactions found over '''9''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
* [[PWY-5744]]
+
{{#set: transcription-direction=negative}}
** '''4''' reactions found over '''13''' reactions in the full pathway
+
{{#set: right-end-position=35399}}
* [[PWY-5743]]
+
{{#set: left-end-position=27124}}
** '''5''' reactions found over '''13''' reactions in the full pathway
+
{{#set: centisome-position=31.020838   }}
* [[PWY-5789]]
 
** '''8''' reactions found over '''18''' reactions in the full pathway
 
* [[PWY0-1264]]
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-6722]]
 
** '''1''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-4381]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=97905}}
 
{{#set: left-end-position=80034}}
 
{{#set: centisome-position=48.075397   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=3}}
{{#set: nb pathway associated=8}}
+
{{#set: nb pathway associated=2}}

Revision as of 11:09, 15 January 2021

Gene SJ05842

  • transcription-direction:
    • negative
  • right-end-position:
    • 35399
  • left-end-position:
    • 27124
  • centisome-position:
    • 31.020838

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • TRIGLSYN-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-7420
    • 4 reactions found over 4 reactions in the full pathway