Difference between revisions of "SJ21782"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DITP DITP] == * common-name: ** ditp * smiles: ** c(op(=o)([o-])op(=o)([o-])op(=o)([o-])[o-])c1...")
(Created page with "Category:gene == Gene SJ21782 == * transcription-direction: ** negative * right-end-position: ** 80450 * left-end-position: ** 47546 * centisome-position: ** 25.505049...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DITP DITP] ==
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== Gene SJ21782 ==
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* common-name:
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* transcription-direction:
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** ditp
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** negative
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* smiles:
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* right-end-position:
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** c(op(=o)([o-])op(=o)([o-])op(=o)([o-])[o-])c1(oc(cc(o)1)n3(c=nc2(c(=o)nc=nc=23)))
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** 80450
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* inchi-key:
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* left-end-position:
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** ufjpaqslhagebl-rrkcrqdmsa-j
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** 47546
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* molecular-weight:
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* centisome-position:
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** 488.137
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** 25.505049   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-14228]]
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* [[S.japonica_carotenoid_curated]]
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* [[RXN0-1602]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[RXN-8988]]
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* [[RXN-14228]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=ditp}}
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* [[SUCCCOASYN-RXN]]
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{{#set: inchi-key=inchikey=ufjpaqslhagebl-rrkcrqdmsa-j}}
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** Category: [[annotation]]
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{{#set: molecular-weight=488.137}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[SUCCINATE--COA-LIGASE-GDP-FORMING-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[SUCL_LPAREN_gdp_RPAREN_m]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PWY-5749]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[P42-PWY]]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-5392]]
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** '''6''' reactions found over '''12''' reactions in the full pathway
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* [[PWY-5690]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY66-398]]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-6969]]
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** '''10''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-5913]]
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** '''10''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5538]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-5537]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[TCA]]
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** '''9''' reactions found over '''10''' reactions in the full pathway
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* [[P23-PWY]]
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** '''9''' reactions found over '''12''' reactions in the full pathway
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* [[PWY-7384]]
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** '''6''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-6728]]
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** '''11''' reactions found over '''19''' reactions in the full pathway
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</div>
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=80450}}
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{{#set: left-end-position=47546}}
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{{#set: centisome-position=25.505049    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=4}}
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{{#set: nb pathway associated=13}}

Latest revision as of 11:04, 18 March 2021

Gene SJ21782

  • transcription-direction:
    • negative
  • right-end-position:
    • 80450
  • left-end-position:
    • 47546
  • centisome-position:
    • 25.505049

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5749
    • 1 reactions found over 4 reactions in the full pathway
  • P42-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-5392
    • 6 reactions found over 12 reactions in the full pathway
  • PWY-5690
    • 8 reactions found over 9 reactions in the full pathway
  • PWY66-398
    • 10 reactions found over 10 reactions in the full pathway
  • PWY-6969
    • 10 reactions found over 9 reactions in the full pathway
  • PWY-5913
    • 10 reactions found over 8 reactions in the full pathway
  • PWY-5538
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-5537
    • 2 reactions found over 2 reactions in the full pathway
  • TCA
    • 9 reactions found over 10 reactions in the full pathway
  • P23-PWY
    • 9 reactions found over 12 reactions in the full pathway
  • PWY-7384
    • 6 reactions found over 10 reactions in the full pathway
  • PWY-6728
    • 11 reactions found over 19 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ21782&oldid=133560"