Difference between revisions of "SJ21809"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-KETO-ISOVALERATE 2-KETO-ISOVALERATE] == * common-name: ** 3-methyl-2-oxobutanoate * smiles: *...")
 
(Created page with "Category:gene == Gene SJ16653 == * transcription-direction: ** positive * right-end-position: ** 195029 * left-end-position: ** 115207 * centisome-position: ** 41.407257...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-KETO-ISOVALERATE 2-KETO-ISOVALERATE] ==
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== Gene SJ16653 ==
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* common-name:
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* transcription-direction:
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** 3-methyl-2-oxobutanoate
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** positive
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* smiles:
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* right-end-position:
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** cc(c(c([o-])=o)=o)c
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** 195029
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* inchi-key:
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* left-end-position:
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** qhkabhooewyvli-uhfffaoysa-m
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** 115207
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* molecular-weight:
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* centisome-position:
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** 115.108
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** 41.407257   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[1.2.1.25-RXN]]
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* [[S.japonica_carotenoid_curated]]
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* [[1.2.4.4-RXN]]
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== Reaction(s) associated ==
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* [[2-ISOPROPYLMALATESYN-RXN]]
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* [[ATPASE-RXN]]
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* [[3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN]]
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** Category: [[annotation]]
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* [[BRANCHED-CHAINAMINOTRANSFERVAL-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[IPMS]]
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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* [[KETOPANTOALDOLASE-RXN]]
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** Category: [[annotation]]
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* [[MOHMT]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[MTMOHT]]
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* [[RXN-12195]]
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* [[RXN-15635]]
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** Category: [[annotation]]
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== Reaction(s) known to produce the compound ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[1.2.4.4-RXN]]
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* [[RXN-12196]]
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* [[3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN]]
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** Category: [[annotation]]
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* [[BRANCHED-CHAINAMINOTRANSFERVAL-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[DIHYDROXYISOVALDEHYDRAT-RXN]]
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* [[RXN0-5462]]
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* [[KETOPANTOALDOLASE-RXN]]
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** Category: [[annotation]]
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* [[MOHMT]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reaction(s) of unknown directionality ==
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== Pathway(s) associated ==
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{{#set: common-name=3-methyl-2-oxobutanoate}}
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* [[PWY-7210]]
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{{#set: inchi-key=inchikey=qhkabhooewyvli-uhfffaoysa-m}}
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** '''8''' reactions found over '''8''' reactions in the full pathway
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{{#set: molecular-weight=115.108}}
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=195029}}
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{{#set: left-end-position=115207}}
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{{#set: centisome-position=41.407257    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=5}}
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{{#set: nb pathway associated=4}}

Revision as of 14:20, 26 August 2019

Gene SJ16653

  • transcription-direction:
    • positive
  • right-end-position:
    • 195029
  • left-end-position:
    • 115207
  • centisome-position:
    • 41.407257

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway




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