Difference between revisions of "SJ21814"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17382 CPD-17382] == * common-name: ** (3r)-hydroxy-tetracosapentaenoyl-coa * smiles: ** ccc...")
(Created page with "Category:gene == Gene SJ21814 == * transcription-direction: ** negative * right-end-position: ** 29957 * left-end-position: ** 2893 * centisome-position: ** 1.5572433...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17382 CPD-17382] ==
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== Gene SJ21814 ==
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* common-name:
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* transcription-direction:
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** (3r)-hydroxy-tetracosapentaenoyl-coa
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** negative
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* smiles:
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* right-end-position:
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** ccc=ccc=ccc=ccc=ccc=ccccccc(o)cc(sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-])=o
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** 29957
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* inchi-key:
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* left-end-position:
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** drqaurckckdinz-kpyxopptsa-j
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** 2893
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* molecular-weight:
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* centisome-position:
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** 1120.05
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** 1.5572433   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-16130]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-16129]]
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* [[ATPASE-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=(3r)-hydroxy-tetracosapentaenoyl-coa}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=drqaurckckdinz-kpyxopptsa-j}}
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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{{#set: molecular-weight=1120.05}}
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12195]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12196]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5462]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=29957}}
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{{#set: left-end-position=2893}}
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{{#set: centisome-position=1.5572433    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=5}}
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{{#set: nb pathway associated=4}}

Latest revision as of 11:01, 18 March 2021

Gene SJ21814

  • transcription-direction:
    • negative
  • right-end-position:
    • 29957
  • left-end-position:
    • 2893
  • centisome-position:
    • 1.5572433

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ21814&oldid=131951"