Difference between revisions of "SJ21814"

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(Created page with "Category:gene == Gene SJ19719 == * transcription-direction: ** positive * right-end-position: ** 180530 * left-end-position: ** 162989 * centisome-position: ** 73.356346...")
(Created page with "Category:gene == Gene SJ21814 == * transcription-direction: ** negative * right-end-position: ** 29957 * left-end-position: ** 2893 * centisome-position: ** 1.5572433...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ19719 ==
+
== Gene SJ21814 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 180530
+
** 29957
 
* left-end-position:
 
* left-end-position:
−
** 162989
+
** 2893
 
* centisome-position:
 
* centisome-position:
−
** 73.356346    
+
** 1.5572433    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[DIHYDROXYISOVALDEHYDRAT-RXN]]
+
* [[ATPASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[DIHYDROXYMETVALDEHYDRAT-RXN]]
+
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PGLUCONDEHYDRAT-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-11717]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[VALSYN-PWY]]
+
* [[PWY-6545]]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7111]]
+
* [[PWY-7210]]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-5103]]
+
* [[PWY-7198]]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
* [[ILEUSYN-PWY]]
+
* [[PWY-7184]]
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-5101]]
+
{{#set: transcription-direction=negative}}
−
** '''4''' reactions found over '''8''' reactions in the full pathway
+
{{#set: right-end-position=29957}}
−
* [[PWY-5104]]
+
{{#set: left-end-position=2893}}
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
{{#set: centisome-position=1.5572433   }}
−
* [[ENTNER-DOUDOROFF-PWY]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6627]]
 
−
** '''3''' reactions found over '''15''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=180530}}
 
−
{{#set: left-end-position=162989}}
 
−
{{#set: centisome-position=73.356346   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=8}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:01, 18 March 2021

Gene SJ21814

  • transcription-direction:
    • negative
  • right-end-position:
    • 29957
  • left-end-position:
    • 2893
  • centisome-position:
    • 1.5572433

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ21814&oldid=131951"