Difference between revisions of "SJ21859"
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(Created page with "Category:gene == Gene SJ05044 == * transcription-direction: ** negative * right-end-position: ** 14838 * left-end-position: ** 11474 * centisome-position: ** 11.771585...") |
(Created page with "Category:gene == Gene SJ04548 == * transcription-direction: ** positive * right-end-position: ** 365947 * left-end-position: ** 334407 * centisome-position: ** 65.665016...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ04548 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 365947 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 334407 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 65.665016 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[2.7.11.30-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | * [[PROTEIN-KINASE-RXN]] |
| − | {{#set: right-end-position= | + | ** Category: [[annotation]] |
| − | {{#set: left-end-position= | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| − | {{#set: centisome-position= | + | ** Category: [[orthology]] |
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN-8443]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[PWY-5381]] | ||
| + | ** '''6''' reactions found over '''11''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: right-end-position=365947}} | ||
| + | {{#set: left-end-position=334407}} | ||
| + | {{#set: centisome-position=65.665016 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated=1}} | + | {{#set: nb reaction associated=3}} |
| + | {{#set: nb pathway associated=1}} | ||
Revision as of 09:26, 27 August 2019
Contents
Gene SJ04548
- transcription-direction:
- positive
- right-end-position:
- 365947
- left-end-position:
- 334407
- centisome-position:
- 65.665016
Organism(s) associated with this gene
Reaction(s) associated
- 2.7.11.30-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- PROTEIN-KINASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-8443
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- PWY-5381
- 6 reactions found over 11 reactions in the full pathway
