Difference between revisions of "SJ21877"

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(Created page with "Category:gene == Gene SJ00293 == * transcription-direction: ** negative * right-end-position: ** 135356 * left-end-position: ** 115560 * centisome-position: ** 68.30353...")
 
(Created page with "Category:gene == Gene SJ10463 == * transcription-direction: ** positive * right-end-position: ** 24317 * left-end-position: ** 23547 * centisome-position: ** 78.731445...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ00293 ==
+
== Gene SJ10463 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 135356
+
** 24317
 
* left-end-position:
 
* left-end-position:
−
** 115560
+
** 23547
 
* centisome-position:
 
* centisome-position:
−
** 68.30353    
+
** 78.731445    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[SGPL11]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[THIOREDOXIN-REDUCT-NADPH-RXN]]
+
* [[F16BDEPHOS-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[SEDOHEPTULOSE-BISPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[SUGAR-PHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[THIOREDOX-PWY]]
+
* [[P185-PWY]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''11''' reactions found over '''12''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY66-399]]
−
{{#set: right-end-position=135356}}
+
** '''11''' reactions found over '''12''' reactions in the full pathway
−
{{#set: left-end-position=115560}}
+
* [[SUCSYN-PWY]]
−
{{#set: centisome-position=68.30353   }}
+
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[CALVIN-PWY]]
 +
** '''12''' reactions found over '''13''' reactions in the full pathway
 +
* [[GLUCONEO-PWY]]
 +
** '''12''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-5484]]
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[GLYCOLYSIS]]
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=24317}}
 +
{{#set: left-end-position=23547}}
 +
{{#set: centisome-position=78.731445   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=7}}

Revision as of 14:21, 26 August 2019

Gene SJ10463

  • transcription-direction:
    • positive
  • right-end-position:
    • 24317
  • left-end-position:
    • 23547
  • centisome-position:
    • 78.731445

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • P185-PWY
    • 11 reactions found over 12 reactions in the full pathway
  • PWY66-399
    • 11 reactions found over 12 reactions in the full pathway
  • SUCSYN-PWY
    • 6 reactions found over 7 reactions in the full pathway
  • CALVIN-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • GLUCONEO-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • PWY-5484
    • 10 reactions found over 11 reactions in the full pathway
  • GLYCOLYSIS
    • 11 reactions found over 12 reactions in the full pathway




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