Difference between revisions of "SJ21877"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ20926 == * transcription-direction: ** negative * right-end-position: ** 197260 * left-end-position: ** 194405 * centisome-position: ** 96.20248...")
(Created page with "Category:gene == Gene SJ07228 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * RXN-8025 ** Category:...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ20926 ==
+
== Gene SJ07228 ==
* transcription-direction:
 
** negative
 
* right-end-position:
 
** 197260
 
* left-end-position:
 
** 194405
 
* centisome-position:
 
** 96.20248   
 
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[RXN1F-19]]
+
* [[RXN-8025]]
** Category: [[annotation]]
+
** Category: [[manual]]
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
 +
* [[RXN-8026]]
 +
** Category: [[manual]]
 +
*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
 +
* [[RXN1F-152]]
 +
** Category: [[manual]]
 +
*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
 +
* [[UNSPECIFIC-MONOOXYGENASE-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-735]]
+
* [[PWY-7638]]
** '''16''' reactions found over '''19''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
{{#set: transcription-direction=negative}}
+
* [[PWY-5944]]
{{#set: right-end-position=197260}}
+
** '''2''' reactions found over '''2''' reactions in the full pathway
{{#set: left-end-position=194405}}
+
* [[PWY-5288]]
{{#set: centisome-position=96.20248    }}
+
** '''2''' reactions found over '''10''' reactions in the full pathway
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=4}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=3}}

Revision as of 13:03, 14 January 2021

Gene SJ07228

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7638
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-5944
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-5288
    • 2 reactions found over 10 reactions in the full pathway