Difference between revisions of "SJ21894"

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(Created page with "Category:gene == Gene SJ07909 == * transcription-direction: ** positive * right-end-position: ** 49612 * left-end-position: ** 35781 * centisome-position: ** 7.9968443...")
(Created page with "Category:gene == Gene SJ21894 == * transcription-direction: ** negative * right-end-position: ** 49440 * left-end-position: ** 31351 * centisome-position: ** 5.3096967...")
 
(One intermediate revision by the same user not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ07909 ==
+
== Gene SJ21894 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 49612
+
** 49440
 
* left-end-position:
 
* left-end-position:
−
** 35781
+
** 31351
 
* centisome-position:
 
* centisome-position:
−
** 7.9968443    
+
** 5.3096967    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PROTEIN-KINASE-RXN]]
−
* [[ACOA120OR]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[ACOA140OR]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[ACOA160OR]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[ACOA40OR]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[ACOA80OR]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[ACYLCOADEHYDROG-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[GLUTACONYL-COA-DECARBOXYLASE-RXN]]
+
{{#set: transcription-direction=negative}}
−
** Category: [[annotation]]
+
{{#set: right-end-position=49440}}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: left-end-position=31351}}
−
* [[GLUTARYL-COA-DEHYDROG-RXN]]
+
{{#set: centisome-position=5.3096967   }}
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[GLUTARYL-COA-DEHYDROGENASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
−
== Pathway(s) associated ==
 
−
* [[FAO-PWY]]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7401]]
 
−
** '''6''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-5177]]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[P162-PWY]]
 
−
** '''7''' reactions found over '''11''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=49612}}
 
−
{{#set: left-end-position=35781}}
 
−
{{#set: centisome-position=7.9968443   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=10}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=4}}
 

Latest revision as of 11:09, 18 March 2021

Gene SJ21894

  • transcription-direction:
    • negative
  • right-end-position:
    • 49440
  • left-end-position:
    • 31351
  • centisome-position:
    • 5.3096967

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ21894&oldid=135682"