Difference between revisions of "SJ21966"

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(Created page with "Category:gene == Gene SJ03655 == * transcription-direction: ** positive * right-end-position: ** 136197 * left-end-position: ** 105471 * centisome-position: ** 10.334702...")
(Created page with "Category:gene == Gene SJ21966 == * transcription-direction: ** positive * right-end-position: ** 180219 * left-end-position: ** 175777 * centisome-position: ** 29.941813...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ03655 ==
+
== Gene SJ21966 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 136197
+
** 180219
 
* left-end-position:
 
* left-end-position:
−
** 105471
+
** 175777
 
* centisome-position:
 
* centisome-position:
−
** 10.334702    
+
** 29.941813    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[2.7.10.1-RXN]]
−
* [[PMPOXI-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[2.7.12.1-RXN]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PNPOXI-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[PROTEIN-KINASE-RXN]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PYRIDOXINE-4-OXIDASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12752]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-13142]]
+
* [[RXN-14906]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
</div>
 
−
== Pathway(s) associated ==
 
−
* [[PLPSAL-PWY]]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7204]]
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PYRIDOXSYN-PWY]]
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7282]]
 
−
** '''6''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-5499]]
 
−
** '''1''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-6938]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=136197}}
+
{{#set: right-end-position=180219}}
−
{{#set: left-end-position=105471}}
+
{{#set: left-end-position=175777}}
−
{{#set: centisome-position=10.334702   }}
+
{{#set: centisome-position=29.941813   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=6}}
 

Latest revision as of 11:04, 18 March 2021

Gene SJ21966

  • transcription-direction:
    • positive
  • right-end-position:
    • 180219
  • left-end-position:
    • 175777
  • centisome-position:
    • 29.941813

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ21966&oldid=133229"