Difference between revisions of "SJ22022"

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(Created page with "Category:gene == Gene SJ12529 == * transcription-direction: ** positive * right-end-position: ** 93783 * left-end-position: ** 84310 * centisome-position: ** 23.567461...")
(Created page with "Category:gene == Gene SJ20823 == * transcription-direction: ** positive * right-end-position: ** 45114 * left-end-position: ** 39823 * centisome-position: ** 19.627296...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ12529 ==
+
== Gene SJ20823 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
** 93783
+
** 45114
 
* left-end-position:
 
* left-end-position:
** 84310
+
** 39823
 
* centisome-position:
 
* centisome-position:
** 23.567461    
+
** 19.627296    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[1TRANSKETO-RXN]]
+
* [[PROTEIN-KINASE-RXN]]
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[2TRANSKETO-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[DXS-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8443]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-5381]]
* [[P124-PWY]]
+
** '''6''' reactions found over '''11''' reactions in the full pathway
** '''12''' reactions found over '''15''' reactions in the full pathway
 
* [[CALVIN-PWY]]
 
** '''12''' reactions found over '''13''' reactions in the full pathway
 
* [[P185-PWY]]
 
** '''11''' reactions found over '''12''' reactions in the full pathway
 
* [[PWY-1861]]
 
** '''7''' reactions found over '''9''' reactions in the full pathway
 
* [[P21-PWY]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
* [[NONOXIPENT-PWY]]
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-5723]]
 
** '''10''' reactions found over '''10''' reactions in the full pathway
 
* [[PWY-6901]]
 
** '''10''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-6891]]
 
** '''4''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-6892]]
 
** '''5''' reactions found over '''7''' reactions in the full pathway
 
* [[PYRIDOXSYN-PWY]]
 
** '''3''' reactions found over '''7''' reactions in the full pathway
 
* [[NONMEVIPP-PWY]]
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-7560]]
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
</div>
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
{{#set: right-end-position=93783}}
+
{{#set: right-end-position=45114}}
{{#set: left-end-position=84310}}
+
{{#set: left-end-position=39823}}
{{#set: centisome-position=23.567461   }}
+
{{#set: centisome-position=19.627296   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=13}}
+
{{#set: nb pathway associated=1}}

Revision as of 15:15, 5 January 2021

Gene SJ20823

  • transcription-direction:
    • positive
  • right-end-position:
    • 45114
  • left-end-position:
    • 39823
  • centisome-position:
    • 19.627296

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5381
    • 6 reactions found over 11 reactions in the full pathway