Difference between revisions of "SJ22053"

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(Created page with "Category:gene == Gene SJ11952 == * transcription-direction: ** positive * right-end-position: ** 29619 * left-end-position: ** 21165 * centisome-position: ** 5.8367047...")
(Created page with "Category:gene == Gene SJ10612 == * transcription-direction: ** negative * right-end-position: ** 11956 * left-end-position: ** 2044 * centisome-position: ** 7.271175 =...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ11952 ==
+
== Gene SJ10612 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 29619
+
** 11956
 
* left-end-position:
 
* left-end-position:
−
** 21165
+
** 2044
 
* centisome-position:
 
* centisome-position:
−
** 5.8367047    
+
** 7.271175    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN]]
+
* [[PEROXID-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN3DJ-170]]
+
* [[RXN-14240]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN66-221]]
+
* [[RXN-15288]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17352]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8635]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[TYROSINE-DECARBOXYLASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7214]]
−
* [[PWY-3181]]
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
* [[PWY-7445]]
−
* [[PWY-581]]
 
−
** '''5''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-5473]]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5877]]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6326]]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6307]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7936]]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5290]]
 
−
** '''2''' reactions found over '''17''' reactions in the full pathway
 
−
* [[PWY-6030]]
 
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY66-301]]
+
* [[PWY-5466]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-5426]]
+
* [[PWY-6824]]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-5403]]
+
* [[PWY-5469]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-3581]]
+
* [[PWY-5461]]
−
** '''6''' reactions found over '''11''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-5254]]
+
{{#set: transcription-direction=negative}}
−
** '''1''' reactions found over '''8''' reactions in the full pathway
+
{{#set: right-end-position=11956}}
−
* [[PWY-6133]]
+
{{#set: left-end-position=2044}}
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
{{#set: centisome-position=7.271175   }}
−
* [[PWY-7297]]
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
{{#set: nb reaction associated=5}}
−
* [[PWY-6802]]
+
{{#set: nb pathway associated=6}}
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7826]]
 
−
** '''2''' reactions found over '''25''' reactions in the full pathway
 
−
* [[PWY-5474]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=29619}}
 
−
{{#set: left-end-position=21165}}
 
−
{{#set: centisome-position=5.8367047   }}
 
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
−
{{#set: nb reaction associated=4}}
 
−
{{#set: nb pathway associated=19}}
 

Revision as of 14:44, 5 January 2021

Gene SJ10612

  • transcription-direction:
    • negative
  • right-end-position:
    • 11956
  • left-end-position:
    • 2044
  • centisome-position:
    • 7.271175

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ22053&oldid=54106"