Difference between revisions of "SJ22083"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PROTOHEME PROTOHEME] == * common-name: ** ferroheme b * smiles: ** c=cc1(c(c)=c7(c=c8(c(c)=c(cc...")
(Created page with "Category:gene == Gene SJ22083 == * transcription-direction: ** positive * right-end-position: ** 60995 * left-end-position: ** 56655 * centisome-position: ** 9.657245...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PROTOHEME PROTOHEME] ==
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== Gene SJ22083 ==
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* common-name:
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* transcription-direction:
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** ferroheme b
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** positive
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* smiles:
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* right-end-position:
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** c=cc1(c(c)=c7(c=c8(c(c)=c(ccc(=o)[o-])c6(=[n+]([fe--]24(n(c=1c=c3(c(c)=c(c=c)c(=[n+]23)c=c5(c(c)=c(ccc(=o)[o-])c(n45)=c6)))7))8))))
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** 60995
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* inchi-key:
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* left-end-position:
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** kabfmibpwcxcrk-rggahwmasa-j
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** 56655
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* molecular-weight:
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* centisome-position:
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** 614.482
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** 9.657245   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[HEME-OXYGENASE-DECYCLIZING-RXN]]
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* [[S.japonica_carotenoid_curated]]
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* [[HEMEOSYN-RXN]]
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== Reaction(s) associated ==
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* [[PROTOHEMEFERROCHELAT-RXN]]
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* [[ATPASE-RXN]]
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* [[RXN-17523]]
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** Category: [[annotation]]
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== Reaction(s) known to produce the compound ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[PROTOHEMEFERROCHELAT-RXN]]
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=ferroheme b}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=kabfmibpwcxcrk-rggahwmasa-j}}
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* [[RXN-12195]]
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{{#set: molecular-weight=614.482}}
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12196]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5462]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=60995}}
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{{#set: left-end-position=56655}}
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{{#set: centisome-position=9.657245    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=5}}
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{{#set: nb pathway associated=4}}

Latest revision as of 11:01, 18 March 2021

Gene SJ22083

  • transcription-direction:
    • positive
  • right-end-position:
    • 60995
  • left-end-position:
    • 56655
  • centisome-position:
    • 9.657245

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ22083&oldid=132029"