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| Line 1: |
Line 1: |
| | [[Category:gene]] | | [[Category:gene]] |
| − | == Gene SJ16098 == | + | == Gene SJ14722 == |
| − | * transcription-direction:
| |
| − | ** negative
| |
| − | * right-end-position:
| |
| − | ** 5978
| |
| − | * left-end-position:
| |
| − | ** 1614
| |
| − | * centisome-position:
| |
| − | ** 26.581028
| |
| | == Organism(s) associated with this gene == | | == Organism(s) associated with this gene == |
| | * [[S.japonica_carotenoid_curated]] | | * [[S.japonica_carotenoid_curated]] |
| | == Reaction(s) associated == | | == Reaction(s) associated == |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| + | * [[RXN-4021]] |
| − | * [[4-NITROPHENYLPHOSPHATASE-RXN]] | |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * [[5-NUCLEOTID-RXN]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| | ** Category: [[orthology]] | | ** Category: [[orthology]] |
| − | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a |
| − | * [[AMP-DEPHOSPHORYLATION-RXN]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
| |
| − | * [[NUCLEOTIDASE-RXN]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * [[RXN-14025]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
| |
| − | * [[RXN-14026]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
| |
| − | * [[RXN-14227]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
| |
| − | * [[RXN-14473]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * [[RXN-17947]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * [[RXN-17948]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * [[RXN-5841]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
| |
| − | * [[RXN-7607]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
| |
| − | * [[RXN-7609]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
| |
| − | * [[XMPXAN-RXN]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
| |
| − | </div>
| |
| | == Pathway(s) associated == | | == Pathway(s) associated == |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| + | * [[PWY-2541]] |
| − | * [[SALVADEHYPOX-PWY]]
| + | ** '''11''' reactions found over '''35''' reactions in the full pathway |
| − | ** '''5''' reactions found over '''5''' reactions in the full pathway
| + | * [[PWY-7155]] |
| − | * [[PWY-7821]]
| + | ** '''4''' reactions found over '''6''' reactions in the full pathway |
| − | ** '''2''' reactions found over '''9''' reactions in the full pathway
| |
| − | * [[PWY-7185]]
| |
| − | ** '''5''' reactions found over '''5''' reactions in the full pathway
| |
| − | * [[PWY-5381]] | |
| − | ** '''6''' reactions found over '''11''' reactions in the full pathway | |
| − | * [[NAD-BIOSYNTHESIS-II]]
| |
| − | ** '''4''' reactions found over '''3''' reactions in the full pathway
| |
| − | * [[PWY-6596]] | |
| − | ** '''7''' reactions found over '''8''' reactions in the full pathway
| |
| − | * [[PWY-6606]]
| |
| − | ** '''4''' reactions found over '''4''' reactions in the full pathway | |
| − | * [[PWY-6607]]
| |
| − | ** '''3''' reactions found over '''4''' reactions in the full pathway
| |
| − | * [[PWY-6608]]
| |
| − | ** '''4''' reactions found over '''4''' reactions in the full pathway
| |
| − | * [[PWY-5695]]
| |
| − | ** '''4''' reactions found over '''4''' reactions in the full pathway
| |
| − | </div>
| |
| − | {{#set: transcription-direction=negative}}
| |
| − | {{#set: right-end-position=5978}}
| |
| − | {{#set: left-end-position=1614}}
| |
| − | {{#set: centisome-position=26.581028 }}
| |
| | {{#set: organism associated=S.japonica_carotenoid_curated}} | | {{#set: organism associated=S.japonica_carotenoid_curated}} |
| − | {{#set: nb reaction associated=14}} | + | {{#set: nb reaction associated=1}} |
| − | {{#set: nb pathway associated=10}} | + | {{#set: nb pathway associated=2}} |
