Difference between revisions of "SJ22156"

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(Created page with "Category:gene == Gene SJ14723 == * transcription-direction: ** positive * right-end-position: ** 91254 * left-end-position: ** 90358 * centisome-position: ** 29.10071...")
(Created page with "Category:gene == Gene SJ05908 == * transcription-direction: ** negative * right-end-position: ** 36374 * left-end-position: ** 10569 * centisome-position: ** 12.234055...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ14723 ==
+
== Gene SJ05908 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 91254
+
** 36374
 
* left-end-position:
 
* left-end-position:
−
** 90358
+
** 10569
 
* centisome-position:
 
* centisome-position:
−
** 29.10071    
+
** 12.234055    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[1.1.1.197-RXN]]
+
* [[ATPASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[CARBONYL-REDUCTASE-NADPH-RXN]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PROSTAGLANDIN-E2-9-REDUCTASE-RXN]]
+
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RIBITOL-2-DEHYDROGENASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[RIBITOLUTIL-PWY]]
+
* [[PWY-7210]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-7198]]
−
{{#set: right-end-position=91254}}
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
{{#set: left-end-position=90358}}
+
* [[PWY-7184]]
−
{{#set: centisome-position=29.10071   }}
+
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6545]]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=36374}}
 +
{{#set: left-end-position=10569}}
 +
{{#set: centisome-position=12.234055   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=4}}

Revision as of 13:01, 14 January 2021

Gene SJ05908

  • transcription-direction:
    • negative
  • right-end-position:
    • 36374
  • left-end-position:
    • 10569
  • centisome-position:
    • 12.234055

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway




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