Difference between revisions of "SJ22166"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ19765 == * transcription-direction: ** positive * right-end-position: ** 19504 * left-end-position: ** 4520 * centisome-position: ** 2.0526514...")
 
(Created page with "Category:gene == Gene SJ22166 == * transcription-direction: ** negative * right-end-position: ** 468963 * left-end-position: ** 455190 * centisome-position: ** 78.015495...")
 
(9 intermediate revisions by 5 users not shown)
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ19765 ==
+
== Gene SJ22166 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 19504
+
** 468963
 
* left-end-position:
 
* left-end-position:
−
** 4520
+
** 455190
 
* centisome-position:
 
* centisome-position:
−
** 2.0526514    
+
** 78.015495    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[INORGPYROPHOSPHAT-RXN]]
+
* [[3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[ENOYL-COA-DELTA-ISOM-RXN]]
 +
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[HICH]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-13721]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-6384]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7805]]
+
* [[VALDEG-PWY]]
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
** '''6''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-7807]]
+
* [[PWY-5137]]
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[FAO-PWY]]
−
{{#set: right-end-position=19504}}
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
{{#set: left-end-position=4520}}
+
* [[PWY-3941]]
−
{{#set: centisome-position=2.0526514   }}
+
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7574]]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=468963}}
 +
{{#set: left-end-position=455190}}
 +
{{#set: centisome-position=78.015495   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=5}}

Latest revision as of 11:10, 18 March 2021

Gene SJ22166

  • transcription-direction:
    • negative
  • right-end-position:
    • 468963
  • left-end-position:
    • 455190
  • centisome-position:
    • 78.015495

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • VALDEG-PWY
    • 6 reactions found over 8 reactions in the full pathway
  • PWY-5137
    • 1 reactions found over 1 reactions in the full pathway
  • FAO-PWY
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-3941
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-7574
    • 3 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ22166&oldid=136462"