Difference between revisions of "SJ22183"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GlcA-Gal-Gal-Xyl-Proteins GlcA-Gal-Gal-Xyl-Proteins] == * common-name: ** a [protein]-3-o-(&bet...")
(Created page with "Category:gene == Gene SJ22183 == * transcription-direction: ** negative * right-end-position: ** 19323 * left-end-position: ** 11412 * centisome-position: ** 6.3480763...")
 
(7 intermediate revisions by 3 users not shown)
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[[Category:metabolite]]
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[[Category:gene]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GlcA-Gal-Gal-Xyl-Proteins GlcA-Gal-Gal-Xyl-Proteins] ==
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== Gene SJ22183 ==
* common-name:
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* transcription-direction:
** a [protein]-3-o-(β-d-glca-(1→3)-β-d-gal-(1→3)-β-d-gal-(1→4)-β-d-xyl)-l-serine
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** negative
== Reaction(s) known to consume the compound ==
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* right-end-position:
* [[2.4.1.223-RXN]]
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** 19323
== Reaction(s) known to produce the compound ==
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* left-end-position:
== Reaction(s) of unknown directionality ==
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** 11412
{{#set: common-name=a [protein]-3-o-(β-d-glca-(1→3)-β-d-gal-(1→3)-β-d-gal-(1→4)-β-d-xyl)-l-serine}}
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* centisome-position:
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** 6.3480763   
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== Organism(s) associated with this gene  ==
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) associated ==
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* [[ARYLFORMAMIDASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-17150]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-7717]]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[TRPCAT-PWY]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-5651]]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7765]]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6309]]
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** '''7''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-7733]]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7734]]
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** '''1''' reactions found over '''10''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=19323}}
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{{#set: left-end-position=11412}}
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{{#set: centisome-position=6.3480763    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=2}}
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{{#set: nb pathway associated=7}}

Latest revision as of 11:01, 18 March 2021

Gene SJ22183

  • transcription-direction:
    • negative
  • right-end-position:
    • 19323
  • left-end-position:
    • 11412
  • centisome-position:
    • 6.3480763

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7717
    • 3 reactions found over 6 reactions in the full pathway
  • TRPCAT-PWY
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5651
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-7765
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-6309
    • 7 reactions found over 11 reactions in the full pathway
  • PWY-7733
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-7734
    • 1 reactions found over 10 reactions in the full pathway