Difference between revisions of "SJ22183"

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(Created page with "Category:gene == Gene SJ07762 == * transcription-direction: ** negative * right-end-position: ** 33939 * left-end-position: ** 27138 * centisome-position: ** 43.40205...")
(Created page with "Category:gene == Gene SJ22183 == * transcription-direction: ** negative * right-end-position: ** 19323 * left-end-position: ** 11412 * centisome-position: ** 6.3480763...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ07762 ==
+
== Gene SJ22183 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 33939
+
** 19323
 
* left-end-position:
 
* left-end-position:
−
** 27138
+
** 11412
 
* centisome-position:
 
* centisome-position:
−
** 43.40205    
+
** 6.3480763    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[CARBODEHYDRAT-RXN]]
+
* [[ARYLFORMAMIDASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-17150]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN0-5224]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7115]]
+
* [[PWY-7717]]
−
** '''9''' reactions found over '''11''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-7117]]
+
* [[TRPCAT-PWY]]
−
** '''10''' reactions found over '''14''' reactions in the full pathway
 
−
* [[PWY-6142]]
 
−
** '''10''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-5744]]
 
−
** '''4''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWYQT-4429]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[CYANCAT-PWY]]
 
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5789]]
+
* [[PWY-5651]]
−
** '''8''' reactions found over '''18''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-5743]]
+
* [[PWY-7765]]
−
** '''5''' reactions found over '''13''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-241]]
+
* [[PWY-6309]]
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
** '''7''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-7733]]
 +
** '''1''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7734]]
 +
** '''1''' reactions found over '''10''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=33939}}
+
{{#set: right-end-position=19323}}
−
{{#set: left-end-position=27138}}
+
{{#set: left-end-position=11412}}
−
{{#set: centisome-position=43.40205   }}
+
{{#set: centisome-position=6.3480763   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=2}}
 
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=9}}
+
{{#set: nb pathway associated=7}}

Latest revision as of 11:01, 18 March 2021

Gene SJ22183

  • transcription-direction:
    • negative
  • right-end-position:
    • 19323
  • left-end-position:
    • 11412
  • centisome-position:
    • 6.3480763

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7717
    • 3 reactions found over 6 reactions in the full pathway
  • TRPCAT-PWY
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5651
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-7765
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-6309
    • 7 reactions found over 11 reactions in the full pathway
  • PWY-7733
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-7734
    • 1 reactions found over 10 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ22183&oldid=131956"