Difference between revisions of "SJ22198"
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(Created page with "Category:gene == Gene SJ16454 == * transcription-direction: ** positive * right-end-position: ** 272225 * left-end-position: ** 270627 * centisome-position: ** 95.83584...") |
(Created page with "Category:gene == Gene SJ22198 == * transcription-direction: ** negative * right-end-position: ** 132254 * left-end-position: ** 112917 * centisome-position: ** 62.900448...") |
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[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ22198 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 132254 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 112917 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 62.900448 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| − | |||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | * [[ | + | * [[RXN66-579]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[ | + | * [[PWY-4661]] |
| − | ** '''3''' reactions found over ''' | + | ** '''3''' reactions found over '''7''' reactions in the full pathway |
| − | * [[ | + | * [[PWY-6372]] |
| + | ** '''3''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[PWY-2301]] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY-6664]] | ||
| + | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-6580]] | ||
| + | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[PWY1G-0]] | ||
** '''3''' reactions found over '''6''' reactions in the full pathway | ** '''3''' reactions found over '''6''' reactions in the full pathway | ||
| − | + | {{#set: transcription-direction=negative}} | |
| − | + | {{#set: right-end-position=132254}} | |
| − | + | {{#set: left-end-position=112917}} | |
| − | + | {{#set: centisome-position=62.900448 }} | |
| − | {{#set: transcription-direction= | ||
| − | {{#set: right-end-position= | ||
| − | {{#set: left-end-position= | ||
| − | {{#set: centisome-position= | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
{{#set: nb reaction associated=2}} | {{#set: nb reaction associated=2}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=6}} |
Latest revision as of 11:04, 18 March 2021
Contents
Gene SJ22198
- transcription-direction:
- negative
- right-end-position:
- 132254
- left-end-position:
- 112917
- centisome-position:
- 62.900448
Organism(s) associated with this gene
Reaction(s) associated
- MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN66-579
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-4661
- 3 reactions found over 7 reactions in the full pathway
- PWY-6372
- 3 reactions found over 7 reactions in the full pathway
- PWY-2301
- 2 reactions found over 2 reactions in the full pathway
- PWY-6664
- 1 reactions found over 4 reactions in the full pathway
- PWY-6580
- 2 reactions found over 3 reactions in the full pathway
- PWY1G-0
- 3 reactions found over 6 reactions in the full pathway
