Difference between revisions of "SJ22223"

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(Created page with "Category:gene == Gene SJ19261 == * transcription-direction: ** positive * right-end-position: ** 346184 * left-end-position: ** 342172 * centisome-position: ** 53.950775...")
(Created page with "Category:gene == Gene SJ22223 == * transcription-direction: ** positive * right-end-position: ** 88755 * left-end-position: ** 48960 * centisome-position: ** 27.30208...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ19261 ==
+
== Gene SJ22223 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 346184
+
** 88755
 
* left-end-position:
 
* left-end-position:
−
** 342172
+
** 48960
 
* centisome-position:
 
* centisome-position:
−
** 53.950775    
+
** 27.30208    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ATPASE-RXN]]
+
* [[ASPARTATEKIN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-11109]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
** Category: [[annotation]]
+
* [[HOMOSERDEHYDROG-RXN]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12195]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12196]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5462]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6545]]
+
* [[PWY-5097]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''7''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-7210]]
+
* [[PWY-6559]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[P101-PWY]]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[DAPLYSINESYN-PWY]]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-2941]]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-2942]]
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
** '''6''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[PWY-6562]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7153]]
 +
** '''4''' reactions found over '''8''' reactions in the full pathway
 +
* [[HOMOSERSYN-PWY]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=346184}}
+
{{#set: right-end-position=88755}}
−
{{#set: left-end-position=342172}}
+
{{#set: left-end-position=48960}}
−
{{#set: centisome-position=53.950775   }}
+
{{#set: centisome-position=27.30208   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=9}}

Latest revision as of 11:10, 18 March 2021

Gene SJ22223

  • transcription-direction:
    • positive
  • right-end-position:
    • 88755
  • left-end-position:
    • 48960
  • centisome-position:
    • 27.30208

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5097
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-6559
    • 2 reactions found over 4 reactions in the full pathway
  • P101-PWY
    • 2 reactions found over 5 reactions in the full pathway
  • DAPLYSINESYN-PWY
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-2941
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-2942
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6562
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-7153
    • 4 reactions found over 8 reactions in the full pathway
  • HOMOSERSYN-PWY
    • 3 reactions found over 3 reactions in the full pathway




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