Difference between revisions of "SJ22245"

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(Created page with "Category:gene == Gene SJ20890 == * transcription-direction: ** negative * right-end-position: ** 395681 * left-end-position: ** 390837 * centisome-position: ** 64.01938...")
(Created page with "Category:gene == Gene SJ22245 == * transcription-direction: ** negative * right-end-position: ** 55108 * left-end-position: ** 36769 * centisome-position: ** 20.546965...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ20890 ==
+
== Gene SJ22245 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 395681
+
** 55108
 
* left-end-position:
 
* left-end-position:
−
** 390837
+
** 36769
 
* centisome-position:
 
* centisome-position:
−
** 64.01938    
+
** 20.546965    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[3.1.1.64-RXN]]
+
* [[2.7.1.127-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[3.1.1.73-RXN]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[2.7.1.140-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[2.7.1.151-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[CARBOXYLESTERASE-RXN]]
+
* [[2.7.1.152-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
+
* [[RXN-10948]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10711]]
+
* [[RXN-10971]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10767]]
+
* [[RXN-10972]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12086]]
+
* [[RXN-10974]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12252]]
+
* [[RXN-13197]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12575]]
+
* [[RXN-7162]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12579]]
+
* [[RXN-7163]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXNQT-4366]]
+
* [[RXN-7184]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-7186]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[TRIACYLGLYCEROL-LIPASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6784]]
+
* [[PWY-6362]]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6364]]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6303]]
+
* [[PWY-6361]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6857]]
+
* [[PWY-6372]]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6554]]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6365]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6366]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6369]]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-4661]]
 
** '''3''' reactions found over '''7''' reactions in the full pathway
 
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[LIPAS-PWY]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=395681}}
+
{{#set: right-end-position=55108}}
−
{{#set: left-end-position=390837}}
+
{{#set: left-end-position=36769}}
−
{{#set: centisome-position=64.01938   }}
+
{{#set: centisome-position=20.546965   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=12}}
+
{{#set: nb reaction associated=13}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=9}}

Latest revision as of 11:08, 18 March 2021

Gene SJ22245

  • transcription-direction:
    • negative
  • right-end-position:
    • 55108
  • left-end-position:
    • 36769
  • centisome-position:
    • 20.546965

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6362
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6364
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6361
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6372
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6554
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6365
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6366
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6369
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-4661
    • 3 reactions found over 7 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ22245&oldid=135220"