Difference between revisions of "SJ22247"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-4211 CPD-4211] == * common-name: ** dimethylallyl diphosphate * smiles: ** cc(c)=ccop(=o)([...")
(Created page with "Category:gene == Gene SJ14458 == * transcription-direction: ** positive * right-end-position: ** 93453 * left-end-position: ** 89507 * centisome-position: ** 28.431347...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-4211 CPD-4211] ==
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== Gene SJ14458 ==
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* common-name:
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* transcription-direction:
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** dimethylallyl diphosphate
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** positive
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* smiles:
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* right-end-position:
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** cc(c)=ccop(=o)([o-])op(=o)([o-])[o-]
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** 93453
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* inchi-key:
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* left-end-position:
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** cbidrcwhncksto-uhfffaoysa-k
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** 89507
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* molecular-weight:
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* centisome-position:
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** 243.069
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** 28.431347   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[GPPS]]
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* [[S.japonica_sterols_curated]]
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* [[GPPSYN-RXN]]
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== Reaction(s) associated ==
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* [[IPPISOM-RXN]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[RXN-4303]]
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* [[ADPREDUCT-RXN]]
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* [[RXN-4305]]
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** Category: [[annotation]]
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* [[RXN-4307]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-7810]]
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* [[CDPREDUCT-RXN]]
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* [[RXN-7811]]
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** Category: [[annotation]]
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* [[RXN-7813]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-6274]]
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* [[GDPREDUCT-RXN]]
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== Reaction(s) known to produce the compound ==
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** Category: [[annotation]]
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* [[GPPSYN-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[IDI]]
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* [[RIBONUCLEOSIDE-DIP-REDUCTI-RXN]]
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* [[IDS2]]
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** Category: [[annotation]]
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* [[IPPISOM-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-884]]
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* [[RIBONUCLEOSIDE-DIP-REDUCTII-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=dimethylallyl diphosphate}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=cbidrcwhncksto-uhfffaoysa-k}}
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* [[RXN0-722]]
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{{#set: molecular-weight=243.069}}
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-747]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-748]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[UDPREDUCT-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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* [[PWY-7220]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7227]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY0-166]]
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** '''14''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7222]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7226]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=93453}}
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{{#set: left-end-position=89507}}
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{{#set: centisome-position=28.431347    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=9}}
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{{#set: nb pathway associated=9}}

Revision as of 20:19, 18 December 2020

Gene SJ14458

  • transcription-direction:
    • positive
  • right-end-position:
    • 93453
  • left-end-position:
    • 89507
  • centisome-position:
    • 28.431347

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7220
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7227
    • 2 reactions found over 2 reactions in the full pathway
  • PWY0-166
    • 14 reactions found over 13 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7222
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7226
    • 2 reactions found over 2 reactions in the full pathway




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