Difference between revisions of "SJ22251"

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(Created page with "Category:gene == Gene SJ00293 == * transcription-direction: ** negative * right-end-position: ** 135356 * left-end-position: ** 115560 * centisome-position: ** 68.30353...")
(Created page with "Category:gene == Gene SJ17056 == * transcription-direction: ** positive * right-end-position: ** 3341 * left-end-position: ** 2243 * centisome-position: ** 50.93097 ==...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ00293 ==
+
== Gene SJ17056 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 135356
+
** 3341
 
* left-end-position:
 
* left-end-position:
−
** 115560
+
** 2243
 
* centisome-position:
 
* centisome-position:
−
** 68.30353    
+
** 50.93097    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[SGPL11]]
+
* [[ADDALT-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[THIOREDOXIN-REDUCT-NADPH-RXN]]
+
* [[ADENODEAMIN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-13996]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[THIOREDOX-PWY]]
+
* [[PWY-7179-1]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-7179]]
−
{{#set: right-end-position=135356}}
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
{{#set: left-end-position=115560}}
+
* [[PWY-6611]]
−
{{#set: centisome-position=68.30353   }}
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
* [[SALVADEHYPOX-PWY]]
−
{{#set: nb reaction associated=2}}
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
{{#set: nb pathway associated=1}}
+
* [[PWY-6609]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY0-1296]]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=3341}}
 +
{{#set: left-end-position=2243}}
 +
{{#set: centisome-position=50.93097   }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=3}}
 +
{{#set: nb pathway associated=6}}

Revision as of 14:50, 5 January 2021

Gene SJ17056

  • transcription-direction:
    • positive
  • right-end-position:
    • 3341
  • left-end-position:
    • 2243
  • centisome-position:
    • 50.93097

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7179-1
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7179
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6611
    • 2 reactions found over 3 reactions in the full pathway
  • SALVADEHYPOX-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6609
    • 4 reactions found over 4 reactions in the full pathway
  • PWY0-1296
    • 6 reactions found over 6 reactions in the full pathway




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