Difference between revisions of "SJ22257"

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(Created page with "Category:gene == Gene SJ16632 == * transcription-direction: ** positive * right-end-position: ** 50968 * left-end-position: ** 23120 * centisome-position: ** 8.296224...")
(Created page with "Category:gene == Gene SJ22257 == * transcription-direction: ** positive * right-end-position: ** 245863 * left-end-position: ** 218531 * centisome-position: ** 37.504654...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16632 ==
+
== Gene SJ22257 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 50968
+
** 245863
 
* left-end-position:
 
* left-end-position:
−
** 23120
+
** 218531
 
* centisome-position:
 
* centisome-position:
−
** 8.296224    
+
** 37.504654    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[12-OXOPHYTODIENOATE-REDUCTASE-RXN]]
−
* [[ARACHIDONATE-5-LIPOXYGENASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[LIPOXYGENASE-RXN]]
+
* [[NADPH-DEHYDROGENASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-1321]]
+
* [[RXN-9510]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-13395]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-8497]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-8647]]
+
* [[RXN0-5101]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY66-375]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5410]]
 
−
** '''2''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5409]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
* [[PWY-735]]
 
* [[PWY-735]]
 
** '''16''' reactions found over '''19''' reactions in the full pathway
 
** '''16''' reactions found over '''19''' reactions in the full pathway
−
* [[PWY66-392]]
+
* [[PWY-7723]]
−
** '''1''' reactions found over '''11''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-6917]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5406]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5407]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5408]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=50968}}
+
{{#set: right-end-position=245863}}
−
{{#set: left-end-position=23120}}
+
{{#set: left-end-position=218531}}
−
{{#set: centisome-position=8.296224   }}
+
{{#set: centisome-position=37.504654   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=9}}
+
{{#set: nb pathway associated=2}}

Latest revision as of 11:05, 18 March 2021

Gene SJ22257

  • transcription-direction:
    • positive
  • right-end-position:
    • 245863
  • left-end-position:
    • 218531
  • centisome-position:
    • 37.504654

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-735
    • 16 reactions found over 19 reactions in the full pathway
  • PWY-7723
    • 2 reactions found over 8 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ22257&oldid=134087"