Difference between revisions of "SJ22265"

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(Created page with "Category:metabolite == Metabolite PHOSPHORIBOSYL-FORMAMIDO-CARBOXAMIDE == * common-name: ** 5-formamido-1-(5-phospho-d-ribosyl)-imidazole-4-carboxamide * smiles: ** c(op([...")
(Created page with "Category:gene == Gene SJ22256 == * transcription-direction: ** positive * right-end-position: ** 208842 * left-end-position: ** 196253 * centisome-position: ** 33.681267...")
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[[Category:metabolite]]
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[[Category:gene]]
== Metabolite PHOSPHORIBOSYL-FORMAMIDO-CARBOXAMIDE ==
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== Gene SJ22256 ==
* common-name:
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* transcription-direction:
** 5-formamido-1-(5-phospho-d-ribosyl)-imidazole-4-carboxamide
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** positive
* smiles:
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* right-end-position:
** c(op([o-])(=o)[o-])c2(c(o)c(o)c(n1(c=nc(c(=o)n)=c(nc=o)1))o2)
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** 208842
* inchi-key:
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* left-end-position:
** abcooorlyaoboz-kqynxxcusa-l
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** 196253
* molecular-weight:
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* centisome-position:
** 364.208
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** 33.681267   
== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
* [[AICARTRANSFORM-RXN]]
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* [[S.japonica_carotenoid_curated]]
* [[FPAIF]]
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== Reaction(s) associated ==
* [[IMPCYCLOHYDROLASE-RXN]]
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* [[CELLULOSE-SYNTHASE-UDP-FORMING-RXN]]
== Reaction(s) known to produce the compound ==
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** Category: [[annotation]]
* [[AICARTRANSFORM-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[FPAIF]]
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** Category: [[orthology]]
* [[IMPCYCLOHYDROLASE-RXN]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
== Reaction(s) of unknown directionality ==
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* [[PHENOL-BETA-GLUCOSYLTRANSFERASE-RXN]]
{{#set: common-name=5-formamido-1-(5-phospho-d-ribosyl)-imidazole-4-carboxamide}}
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** Category: [[annotation]]
{{#set: inchi-key=inchikey=abcooorlyaoboz-kqynxxcusa-l}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
{{#set: molecular-weight=364.208}}
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== Pathway(s) associated ==
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* [[PWY-1001]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=208842}}
 +
{{#set: left-end-position=196253}}
 +
{{#set: centisome-position=33.681267    }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=2}}
 +
{{#set: nb pathway associated=1}}

Revision as of 13:07, 14 January 2021

Gene SJ22256

  • transcription-direction:
    • positive
  • right-end-position:
    • 208842
  • left-end-position:
    • 196253
  • centisome-position:
    • 33.681267

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-1001
    • 1 reactions found over 1 reactions in the full pathway